Detail information of Asa1G03140


Location
GeneChrStartEndStrand
Asa1G03140chr1853183302853195507+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020252675.12.0e-110LOW QUALITY PROTEIN: PHD finger protein ALFIN-LIKE 2-like
SwissprotB8AMA8.21.5e-99PHD finger protein ALFIN-LIKE 3
trEMBLA0A6I9R7701.2e-109PHD finger protein ALFIN-LIKE 2 isoform X2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G05610.170.946e-83 303AL1alfin-like 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag297428.t1; g432354.t1
Allium fistulosumAfisC7G00239; AfisC8G02048
Allium sativumAsa1G03140.1; Asa3G04735.1
Arabidopsis thalianaAT5G05610.1; AT5G05610.2
Oryza sativaLOC_Os03g60390.1; LOC_Os05g07040.1; LOC_Os07g12910.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12165.5DUF3594Family11136217.14e-65
PF00628.26PHDDomain18723543.12.5e-11

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0042393Fhistone binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11728BPTF, E(bx); nucleosome-remodeling factor subunit BPTFEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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