result

Gene information

Detail information of Asa1G03196

Location

Gene	Chr	Start	End	Strand
Asa1G03196	chr1	867121358	867123733	+

Sequences

CDS

Protein

Gene

>Asa1G03196.1
ATGACTTCTTCCTCAGGTAGCTTAGAAACATCGGTAAACTCCCTTGGTTTTATGGGTTCGGATCAAATGGATGCGAGTTACTCTAACTTTACCTCAACAGCTCCATCTCCGCTTCTCCTTTCACCTCCTCCAGTTTCTCCTTCTTCGTTCTTCGCAAATGTTCCCAATGGTTTCAATCCCAGCGAGCTTTTGGATTCTCCATCGTTTTATCCTACTTCTAATGTGAGCAAATTTGatgttaaataactatatttgTATTGAACTCATGCAAAACTTCACTTTCATGCTAGCTCATTATAGTTCTTCCtttacaattttttttgtaaacaaatagATTTTGCAATATCCGACGACTGAGAATAGGTCTTCACAAGCACCGGAGTGGATGAGCAATTCCTATCAACAAGGAATcaagaaagaagaaagaagtttCACTGACTTTTCCTTCCAACCACAAACAAGTGCAATGTTTTCAAACAACATGCACCCACCTTACTTTCAACCTTCTACAACATCAGTCTATTCTGTATGTACAATCTTCTCTAACATTTTCAGCGATTTCGTCTACCATTCCTATGATATGtcaatctaatttttatatgtatatatgtaggaTAATGCTTCAATGAAAGAAGGACAATGGAATGCTCAGTTCACTTCCAATACTGAATCACAAACTAAACCTGATCATTACAATGTTCCACTGCAGACTACAGTTCCGTTTCAACAAAACACGATACACAGAGAAGGTAGAAAATCAGACGATGGCTATAATTGGAGAAAATATGGGCAGAAACAAGTGAAAGGGACCGAGCATCCTCGAAGTTACTACAAGTGCACATTCTTAAACTGCACTACTAAGAAAATAATAGAGAGGTCGTTAGATGGTCAGATCACTGAAATTGTCTATAAAGGAACTCATCATCATCCGAAGCCTCAGTCTACTAGAAGGAACTCTTCGTCTTCCTCGTATTCTTCACAATTTGTTGCATTGCCTGTTGAGCAGAATGCTTTGAGTACTGATAATTCTTTGGCTTCTTTTGGCGATTACAATGAAGAACATGAAGATAATGATGAGAAAAGATGGTACTATACTTATATCTGATACAATATTTTatcttccatttttttttaaaatttatgctAGAGTGGTAACAAATTTAAAATTGACTAACCTGACTGGGTACTATAATACCAGCAAAGAGAATGAACATGGTGAAGGAACATCACATTCTGGTAGCAGAACAGTAAGAGAGCCAAGAGTTGTAATTCAGACTACAAGTGACATTGATATACTTGATGATGGATATAGATGGAGAAAATATGGGCAAAAAGTGGTAAAGGGCAATCCTAATCCAAGGTAGTTAACCTATATCTCTTTACATTGTTGATTATTAACAAGTTCTCAgtttatagatttcaaaatattcgGTTATATGCTTTCTGGTTGTGCTTACTGTTCTATTGATTCAAAGTTCCGCAGTTAAATACTACGCAGCTACATAGGTACCGGCTAATTTACAGTTTATTCTCTTACACTAATAACTTGCAAGCTTCTTCATTTATAGTTATTATAGTTCTGAGATTAAGCAAGAAaaattattcaattattcaatatGTAAACCTTGAGCGTGTCTGTCCTGAACAAACACAAACATACTACACACATTTTGCTTCAGTAAGTGTTTTAAGTTTTAACAAATTAACTCGGCTATCATTTTGTGACAATTTATACAAAATAAGGTGCCTCATTACTATAGTAACTTACTGGGTAATACACACAACCAAAATCTTGCccattttacttgaattataacacttccaaaaccatatctaaaaacagattttcttttcattttacatTGGGCTATTGCGAACAGTGTATTTTGTTCATatcttttcaaacacttctttcTCCTATCAGTTTTCATAAGTGGTTATAAAGAAGTAAAAGGTTTAGTCTAACATGAAACTAAGAATTACAATGGTTAATGGAACAGGAGCTATTTCAAATGCACAACAGCAGGGTGCCCAGTGAGAAAACACATAGAAAGGGCACCACACGATTCTGGAGCAGTGATCACAACATACGAAGGAAAGCACATACATGACTTCCCTGCTGCTCGTCGGTACAACGCCCAGAACACTGCAAATAGAACCTCCTTTACTTCTGACCAGACCAACAACAACAGTAACGTTAATTTTACGATCTCCACAAGGCCTTCGACTGTTGCAAATCATCAAAATCCTTATGCATCTGAAATGCTTCAAGGCTCTAACAACTATGGATTCACGatgaatcagaatcaaaatcatcatcatcatcaacagcagcagcaacaacaaactCAAAGAGATGATATATTCTTTGACTAG

Functional annotation

Database	accession number	e-value	annotation
nr	EEF35722.1	1.8e-91	transcription factor, putative
Swissprot	Q6IEQ7.1	1.0e-83	WRKY transcription factor WRKY24
trEMBL	B9SL31	1.3e-91	Transcription factor, putative

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G38470.1	41.47	2e-75	280	ATWRKY33;WRKY33	WRKY DNA-binding protein 33

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa1G03196	AT2G38470.1	463	173	14	45	449	58	480	41.47	2e-75	280
Asa1G03196	AT5G07100.1	345	110	9	51	393	28	297	45.80	8e-70	261
Asa1G03196	AT4G26640.2	437	210	13	39	422	40	472	38.90	1e-69	260

Ortholog group

Species	Genes
Allium cepa	g418406.t1
Allium fistulosum	AfisC8G02007
Allium sativum	Asa1G03196.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	188	244	81.2	4.7e-23
PF03106.12	WRKY	Domain	330	386	84.8	3.5e-24

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13424	WRKY33; WRKY transcription factor 33	EC:-	MAPK signaling pathway - plant	ko04016
K13424	WRKY33; WRKY transcription factor 33	EC:-	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network