Detail information of Asa1G03458


Location
GeneChrStartEndStrand
Asa1G03458chr1940068904940069866-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010921312.18.2e-62transcription factor CSA isoform X1
SwissprotQ5NBM8.23.6e-54Protein CARBON STARVED ANTHER
trEMBLA0A6I9R8275.9e-62transcription factor CSA isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G17800.183.641e-53 206AtMYB56;MYB56myb domain protein 56

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag345925.t1
Allium fistulosumAfisC8G01708
Allium sativumAsa1G03458.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain489361.36.6e-17
PF00249.28Myb_DNA-bindingDomain10114252.43.8e-14

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09422MYBP; transcription factor MYB, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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