result

Gene information

Detail information of Asa1G03565

Location

Gene	Chr	Start	End	Strand
Asa1G03565	chr1	971127551	971130889	-

Sequences

CDS

Protein

Gene

>Asa1G03565.1
ATGGACTCTGCTCTTCATTCCAACTCCAGCTTGCAGAACCAACACAATTCTCTTGGGAATGTTATTCCGATGAGTTCAACGCATTGTCCTCCCCTACTTCCTCCTTTGCCTGTAACATTGGTAAAAAAGTCAAGGAAGTCCCGTAAAGTTGTCCAGGAAAGTGATAATCAGAGTGCTGGCCGAAAACCAACAAGTTCGCTTTTCAAAGGGGTTACAAAGTATTTTGCTACATTTGTGCTTTGCcgatttttaataattgtttttgtcGTATGACAATTAGATTTGTCTGTAACTACAAAATTGCTTGGTCAACCATTTGAGTGATATGGTCATTTTTTAAAGTATAATGCCAATGAATATGTTTTCTACAGATGTTTTCAAATTAGTTCTAATACATTTTTGATGCACGCCATGTCCTTGGGATTAATAGGAACAGGCATACTGGTCGGTTTGAGGTTCATTTATGGGACAGATTTTCTTGGAACCTGAGTCAAAAGAGGAGAGGAAAGCAAGGTATGAAAAGAAAACTATACTTTTGTTTGAGACTGTATCATTTCATTGATTATTTAGGATTTTGAtacattatatagataataatatttaaactaGTATAAAAGCTTTATGTTAATGCATAGTATTgtttattacttcttcttcttctgttttattaagaatgaaaaaagggattatttatttatttagttcttTTTTGCTACTTTTGCATTAATTTTTTTCCTGCCTTTGTTGATGCCTACTGCTTGATGCTTTTGTGTGGGTGCCTAGTTTATTTAGGTATGTCATTATTATATATTCTTGTTTTTGGTATCACTAGGTGCATTTCATTAATATGATATGAGCTTTATACTCCTTTTAGGTTCCTTTGACAATGAGGAGGAAGCCGCTTGCACTTACGATCTTGCAGCACTCAAATTTTCTGGTTTGCACTGTGTTCTCAATTTTCCTGTGAGTATCTGTAGTATAAAAATATTCCTGTGAAATTTCTGATGACCTAATTGAGTAAACTACACATCAGAGCTATTTTCACCCATATTGTTATTTATTTCATCAATTGAAACAATTgcagttgcatacatatatgaaagAATATGCAGAGATGAAGAATGTTTCCAAGAGTGAATACATAGCCAGACTTCGTCGTAAAAGCAGTGGATTTTCAAGGGGGGATTGCAAGTACCGTGGGGTTAccaagtatgatttttttttttttcccttttgtttgtaAATTTGAGTTGAGCATATCATCATGTAAAATATCACACAGCTAAACAAGCtgcataatttttttaacatttaagTCAGTAACTACAAGATAATTAATCTTAAAATTGGATAATTGAAATTCATTATAGACACCATGAAAAAGGGCGATGGCAGGCAAGCATCAGCAATGTGTGTGGTAGAAAGTATCTCTACTTGGGAAGCTTTAGTAAGTTACTAAACAGCTTTGCTCTCTTCTCATTTGATTGCAATATGATGTTTATtcagatgatttttcttttttggaaACCTAGAGCACATGATATAATATCTTAAATAACCCAATTGAATATAGTAGTTTGATCTGAACCATTTGGTCAAAGTTCTAAGGTTATTTTGAAACATTGTATGGTACTCTATTTGGAACATCGGTTCTCGATTCACTTTTATACCCATATTTTACGTATAAACATGTAAAATTAGCTGTACTCACAATGATGTGAAAATTGACCTAGTCGTAAATAATATTGACAAAATATATCTTCCTATTTTGATATTTTCCAAAAACATTTTCCAACCCTATTTCATTctagaaaataagataaaaaaaatctgaaatatgtaaaattggattttatgatgcgaaaatcttatttgaaattgataatttttgtacttaataattaattaaaatgaatctgtttattataattttactttaaacaattttgtatatataactatttatcaAGTAGGAATGTCGTCTGCCAAACACTTTAATTAGTAGCGGGGTTGTGAGATCGTGGAGATTTTGCTTTGTATGATggatcaacccccccccccccccccccccccccgaaaagCTGGCTTTAGACGGTTTCATTTAAGCTGGAATTGTATGGATAAATTCACTAAATAGCCAGTTATTCtgataaataaaattccattttgttcaaatctttttaCAATTGTTTCTGTAAATGACAATCTGTGACCATTATTCAGTCTGCCCTTTTTCCCCTTACAGTTAGTATTTAGCGTGATTTTCCCCGCACACTCCCTAGTTTTCGGGAATCAAAATTTGAAAGCATATGCATGTATGGTTGCATAATAATCTGTTTcgtaataaaatttgttaaattctcAGAAAGTGAGGATGAAGCTGCAACAGCCTACGACCTGGCTGCACTATGCTACCGTGGACCAAATGCTGTAACCAATTTCGACATCAGCAAATATAGAGCTACTCCTTTGCTATTTCAACAAATGGGACTACCACCACTGCCACAACCCTACCAACCAGCTATTACTGGATCTGTTTTGCCTAATTTCGAGAATGTCATATGTTCTGAGTACTCGATCGATTCTGGCATCTCTGGTGCCATGCCAGCAAACACCAGCACTTTATGTGATGGAAATCTGAACTATGCCATGAACCAGAATACCGTTTCTGAGAACATGTTAATGAGTACCAATGTTGCTAGTAGTGGTTTGATGTTGCAGAATGAGGGCATGAACTTAGAAATGGGTAACCATTTGAATGTAGCTCGAAATCAAGGTTCTTCTTCGAATGTATTTCAACAAATGGGACTACCACCACTGCCACAACCATACGAACCAGCTATTACTGGATCTTTTCTGCCTAATTTCGAGAATGTCATCTGTTCAGAGAACTTGATCGATTCTGGCAAATCTGATGCAATGCCTGCAGACACCAGCACTTTATGTGATGGAAATCTGAACTATGCAATGGATCAGAATAGCATTTCTGAGAACATTTTAATGAGCACCGATGTTGCTAATAATGGTTTGATGTTGCAGAATGGGAGCATGGACTTGGAAATGGAGAACCAGTTGAATGTAGCTCGAAATCAGGGTTCTTCTTCGAATATATTTGAACAGTTAAGGGATGGAGAGTGTTTCAGCATGGATGGCGTGTTTGATGCTGCATTATCCgaccaatttggtgatgaattTAGCAAAAACGGTCTTTTTGGTATTGATGACCAGATTGGTGCTGGTTTCCCTGGAACTGCCAGTGAAGAAGATCAAGTTCTTGGGGCTGCTAATTTCACAGGGTTTTCTGGGAACGAAGGATTTCCCCCTTTTCTGTCATTTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	THU68892.1	3.2e-57	hypothetical protein C4D60_Mb08t08640
Swissprot	Q6X5Y6.1	3.8e-55	Protein WRINKLED 1
trEMBL	A0A4S8K2C9	2.3e-57	AP2/ERF domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G51190.1	54.34	4e-53	206	PLT2	Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa1G03565	AT1G51190.1	173	76	1	65	234	188	360	54.34	4e-53	206
Asa1G03565	AT1G51190.1	83	39	2	154	228	178	260	43.37	1e-11	68.6
Asa1G03565	AT1G51190.1	111	65	3	30	134	249	354	31.53	2e-07	54.3

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	165	216	40.6	2.1e-10

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09285	OVM, ANT; AP2-like factor, ANT lineage	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network