Detail information of Asa1G03807


Location
GeneChrStartEndStrand
Asa1G03807chr110384487361038453057+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010938177.11.5e-52zinc finger CCCH domain-containing protein 3 isoform X1
SwissprotQ0JP11.25.4e-39Zinc finger CCCH domain-containing protein 3
trEMBLA0A6I9S6471.1e-52zinc finger CCCH domain-containing protein 3 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G26749.147.742e-32 134C2H2 and C2HC zinc fingers superfamily protein

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Ortholog group
SpeciesGenes
Allium cepag389882.t1
Allium fistulosumAfisC8G01223
Allium sativumAsa1G03807.1
Arabidopsis thalianaAT5G26749.1; AT5G26749.2
Oryza sativaLOC_Os01g14870.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF06220.9zf-U1Domain53938.56.6e-10
PF00642.21zf-CCCHFamily628327.71.7e-06

Gene Ontology
AccessionOntologyName
GO:0003676Fnucleic acid binding
GO:0046872Fmetal ion binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13152ZMAT5; U11/U12 small nuclear ribonucleoprotein 20 kDa proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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