Detail information of Asa1G04050


Location
GeneChrStartEndStrand
Asa1G04050chr110921098421092121734-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020256079.12.3e-195uncharacterized protein LOC109832971 isoform X1
SwissprotF4IXE7.15.9e-103Repressor of silencing 4
trEMBLA0A4S8KFA62.7e-177PHD-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G05380.151.593e-140 496Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag137475.t1; g223673.t1; g493194.t1
Allium fistulosumAfisC2G06783; AfisC7G00016; AfisC8G00984
Allium sativumAsa0G02890.1; Asa1G04050.1; Asa3G04862.1; Asa3G04865.1; Asa7G06343.1
Arabidopsis thalianaAT1G05380.1; AT1G05380.2; AT4G14920.1
Oryza sativaLOC_Os03g53630.1; LOC_Os07g07690.1; LOC_Os07g07690.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF16135.2JasFamily11218486.49.6e-25
PF00628.26PHDDomain22626830.52.2e-07

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K02964RP-S18e, RPS18; small subunit ribosomal protein S18eEC:- Ribosomeko03010

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.