Detail information of Asa1G04176


Location
GeneChrStartEndStrand
Asa1G04176chr111287962721128797712+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010267189.16.2e-42PREDICTED: GATA transcription factor 12-like
SwissprotO82632.14.0e-38GATA transcription factor 9
trEMBLA0A1U8AW424.4e-42GATA transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G32890.137.191e-42 170GATA9GATA transcription factor 9

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag17314.t1
Allium fistulosumAfisC8G00836
Allium sativumAsa1G04176.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00320.24GATADomain21224661.83e-17

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0008270Fzinc ion binding
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K17894GATA2; GATA-binding protein 2EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.