Detail information of Asa1G04264


Location
GeneChrStartEndStrand
Asa1G04264chr111569803021156983793+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrQFE32168.13.6e-56nuclear transcription factor Y
SwissprotQ93ZH2.22.4e-33Transcriptional activator HAP2C
trEMBLA0A5J6SCZ92.6e-56Nuclear transcription factor Y subunit

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G72830.157.042e-36 149ATHAP2C;HAP2C;NF-YA3nuclear factor Y, subunit A3

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Ortholog group
SpeciesGenes
Allium cepag97004.t1
Allium fistulosumAfisC8G00650
Allium sativumAsa1G04264.1
Arabidopsis thaliana
Oryza sativaLOC_Os03g07880.1; LOC_Os03g07880.2; LOC_Os03g07880.3; LOC_Os07g41720.1; LOC_Os07g41720.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02045.12CBFB_NFYAFamily13018592.91.3e-26

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08064NFYA, HAP2; nuclear transcription factor Y, alphaEC:- Antigen processing and presentationko04612

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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