Detail information of Asa1G04397


Location
GeneChrStartEndStrand
Asa1G04397chr111872638411187265479+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK65242.13.7e-101uncharacterized protein A4U43_C07F35130
SwissprotQ8LC03.29.2e-49Homeodomain transcription factor ATHB-13
trEMBLA0A5P1EH752.6e-101Homeobox-leucine zipper protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G69780.151.769e-72 266ATHB13Homeobox-leucine zipper protein family

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag220774.t1; g534426.t1
Allium fistulosumAfisC1G05115; AfisC1G05155; AfisC4G00743; AfisC6G00907; AfisC6G03771; AfisC8G00441; AfisC8G03331
Allium sativumAsa1G04397.1; Asa1G04399.1; Asa4G00762.1
Arabidopsis thalianaAT1G26960.1; AT1G69780.1
Oryza sativaLOC_Os03g07450.1; LOC_Os10g26500.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain9715058.24.7e-16
PF02183.15HALZFamily15219255.15.7e-15

Gene Ontology
AccessionOntologyName
GO:0000976Ftranscription regulatory region sequence-specific DNA binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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