result

Gene information

Detail information of Asa1G04853

Location

Gene	Chr	Start	End	Strand
Asa1G04853	chr1	1324492419	1324494473	+

Sequences

CDS

>Asa1G04853.1
ATGCATGTGAAGGATCCCCCGAGTAAAAGCAATACTGGTGTTGTTATAGGCTCTGCTATAGGTGGTGTTATGGTAGCGCTTTTAGTAGCTGGAGGTGTTATATACCTCTTGCTTCGTAACATTAATGTCAAGAAGAAGAGGAAGGCTGAGGAAGAAAACAAGTGGGCAAAGAATTTGAAGGGTGTCAAAAGTGCCAAGGTTTCAATGTTCGAAAGCTCAGTTTCGAAAATGAAACTAAGTGATCTCCTAGCAGCGACCAATGACTTCAACAAAGAACATGTCATAGCAACTGGTAGAACTGGAACCATGTACAAAGCAGTGCTACCCGATAAAACTATACTTGCCATAAAAAGGCTTCAAGATTCTCACCACTCAGAGACTCAATTCGCATCAGAGATGGCAACACTAGGAATGGTACGGCATAAAAACTTAGTACACCTCATGGGATTTTGTACTGCCAAAAAAGAGCGCCTTTTGGTGTACAAACACATGCCAAATGGCAATCTCTTCGATTCCTTGCACCCAATTGAGGGAGACGTGAAGTTAAAAGACTGGCCAACAAGGCTTAAGATAAGCATTGGAGCAGCAAGAGGCCTAGCTTGGCTTCACCATAACTGTAACCCAAGAATCCTTCATCGTAACATTAGTTCAAAATGCATACTACTAGATGAAGACTATGAAGCTAAAATATCGGATTTTGGGCTTGCAAGACTTATGAACCCAGTTGATACCCATTTAAGTACTTTTGTTAATGGAGAATTTGGCGATTTGGGCTATGTTGCGCCTGAATATGCACGTACTCTAGTAGCAACTCCAAAAGGAGATGTGTATAGTTTTGGAGTAGTGCTTCTTGAATTGGTTACTGGTGAAAAACCTACTCATGTGTCTAAGGCACCTGAGAGTTTTAAAGGGGGTTTAGTTGATTACATCAATTATGTATCTAATATGTCTATTCTTCAAAATGCGGTGGATAGAAGTTTGATTGGTCGTGGATTTGATAGTGAGATTCTTCAAGTGATGAAAGTCGGATTCAACTGTGTTATGCCTACTCCAAAAGAGCGGCCTACCATGTTTGAAGTGTATCAGCTCTTAAGAGCTATAGGCGAGAAATATCAGTTTAGCACGAATGATGATGCATTGATGCAACCCGATAGCAATGCTGCTGATTTAATGGATGAGCTTATCGTTGCAAAATGA

Protein

Gene

>Asa1G04853.1
ATGCATGTGAAGGATCCCCCGAGTAAAAGCAATACTGGTGTTGTTATAGGCTCTGCTATAGGTGGTGTTATGGTAGCGCTTTTAGTAGCTGGAGGTGTTATATACCTCTTGCTTCGTAACATTAATGTcaagaagaagaggaaggctgaGGAAGAAAACAAGTGGGCAAAGAATTTGAAGGGTGTCAAAAGTGCCAAGGCAAGTTTGACTTATTTTCCTGATTCAATCAAAATGATTTTCTTTCCCTAATAAGTTTCACGAGCAAGTTTAGTGCTTTTATCTTGGTTAAACCACAACTTCTGCTATTAGTCTTTGATCATGTTCATAGACTATGAATCTATTTTGGGTTTATTATCTAAAAAAATATCTCATTTACACTGTTTATGCTCCCTAGTACAATAATATATCAACCGAATGAATTTGAACATTCATAAGCCATAATTATATAGATTATTACAAGAAATTCTTAAAGGGATATTTTGGATCACATCactgttaaaattttaaatttggccctCATCCTTCCGTTAATGCTATCAACATCCCAGTTTTTATATTTGTAGAATTGTAGTTGGAAATGATGTAAATTTCGTTTTCAATCAATATTGGATTTAATATTTTATGAATGCTAATCAAATGTTCTAAAAAAGATACTCAAATTTCAAGATAATATGCTGTCACTGCAATATTTGCAATGCAAAATGTTCAGAATTTTCCATTGCGAAATATTAGCAGTGCAGAATTTTATTGGGCAATTTATTGGCTAATATTGTTTAATAttagaaatattggaaaataaaatatcaacatatggTTTCAAAATTATGAGCTATGATTTTAAATGGATGATGACCAGTTGTAAACATATTTGTGATGGAAGAATATGCATTAAAAAAACAGTGATCTAGGAAATATAAGCATAATGACAGGAACACGAAAAATAGTTTTCTTCAAAATGAGAATGTGTACCAAAATTTCTTTTCTGAAACAGGAAATGCAAATGATTCTGAGTACATAAATTTTAAGACGCTATTATTGAAAAATGTCTCTTTTCAGGTTTCAATGTTCGAAAGCTCAGTTTCGAAAATGAAACTAAGTGATCTCCTAGCAGCGACCAATGACTTCAACAAAGAACATGTCATAGCAACTGGTAGAACTGGAACCATGTACAAAGCAGTGCTACCCGATAAAACTATACTTGCCATAAAAAGGCTTCAAGATTCTCACCACTCAGAGACTCAATTCGCATCAGAGATGGCAACACTAGGAATGGTACGGCATAAAAACTTAGTACACCTCATGGGATTTTGTACTGCCAAAAAAGAGCGCCTTTTGGTGTACAAACACATGCCAAATGGCAATCTCTTCGATTCCTTGCACCCAATTGAGGGAGACGTGAAGTTAAAAGACTGGCCAACAAGGCTTAAGATAAGCATTGGAGCAGCAAGAGGCCTAGCTTGGCTTCACCATAACTGTAACCCAAGAATCCTTCATCGTAACATTAGTTCAAAATGCATACTACTAGATGAAGACTATGAAGCTAAAATATCGGATTTTGGGCTTGCAAGACTTATGAACCCAGTTGATACCCATTTAAGTACTTTTGTTAATGGAGAATTTGGCGATTTGGGCTATGTTGCGCCTGAATATGCACGTACTCTAGTAGCAACTCCAAAAGGAGATGTGTATAGTTTTGGAGTAGTGCTTCTTGAATTGGTTACTGGTGAAAAACCTACTCATGTGTCTAAGGCACCTGAGAGTTTTAAAGGGGGTTTAGTTGATTACATCAATTATGTATCTAATATGTCTATTCTTCAAAATGCGGTGGATAGAAGTTTGATTGGTCGTGGATTTGATAGTGAGATTCTTCAAGTGATGAAAGTCGGATTCAACTGTGTTATGCCTACTCCAAAAGAGCGGCCTACCATGTTTGAAGTGTATCAGCTCTTAAGAGCTATAGGCGAGAAATATCAGTTTAGCACGAATGATGATGCATTGATGCAACCCGATAGCAATGCTGCTGATTTAATGGATGAGCTTATCGTTGCAAAATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020245909.1	1.0e-172	probably inactive leucine-rich repeat receptor-like protein kinase At5g48380
Swissprot	Q9ASS4.1	1.1e-131	Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380
trEMBL	A0A5P1E791	7.3e-173	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G48380.1	62.25	9e-144	506	BIR1	BAK1-interacting receptor-like kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa1G04853	AT5G48380.1	400	142	4	8	398	221	620	62.25	9e-144	506
Asa1G04853	AT1G27190.1	364	185	2	19	378	230	590	47.25	6e-96	347
Asa1G04853	AT3G28450.1	375	195	4	8	378	224	591	45.07	3e-91	332

Ortholog group

Species	Genes
Allium cepa	g230123.t1
Allium fistulosum	AfisC4G05644
Allium sativum	Asa0G05685.1; Asa1G04853.1; Asa4G03776.1
Arabidopsis thaliana	AT5G48380.1
Oryza sativa	LOC_Os01g66820.1; LOC_Os05g34270.1; LOC_Os11g14420.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	92	363	131.4	3.2e-38

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04730	IRAK1; interleukin-1 receptor-associated kinase 1	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network