result

Gene information

Detail information of Asa2G00007

Location

Gene	Chr	Start	End	Strand
Asa2G00007	chr2	3959476	3961161	-

Sequences

CDS

>Asa2G00007.1
ATGCTGCGGTCGCTTCGTTATATGATATTTGAGTCGAATTCTTTGACTGGTTCGATTCCTAGTAATTTTGGGAATATGAGTGTTTTGACCTATCTGGACCTCGGTAATAATCTTCTCACTGGATCTATACCCGGTTATTTTGGTAATTTCAGTTATTTACAGTATTTGTATCTTGATAATAACAAGTTATCTTCCCACATCCCTCAAAGCCTGTGGACTTCCAAGAGCCTTCTCGAGATTAACTTATCAAAAAATATGTTAAATGGTCCCCTTCCATTGCAAGAAGACATACTGCCTTTCTTGACCTTTATGGATCTATCAGAAAATCAATTGTCAGGGAACATTTTAAGCCTAGGAAAGCTTCAAATGCTCGACTATTTGGATATATCAAGTAATAGGTTTGATGGTCCCATTCCTGATTCATTCAGCGGACTTATTAGCATAACCGTGATGAATTTATCTCACAATATTTTGTCAGGAAAGATACCAAATTCCTTGTCAAATCTCTCTCATCTTCAAATCCTTGACCTTTCTCATAATAACTTGACAGGACAAGTACCAAAGGGCAGAATTTTCTTAAATTCTAACACCACAATTTTGTCTGGAAACAAAGGGCTTTGTGGCGCTTTTCAGTTTAGCCTTAAGAACTGTGAATCTTTTTCTGTAAAAGTTAAGTCGGTGAAGAGACTAATAGTACTGAAATATGTTCTACCATCACTGGTTGCCTTAATCGTGGTAATTCTTCTCTGCATATGTCTTATATATGCATTTTGCTCGAAAAGGAAGCAAAAGAGTTTGATTCAAACAAACGAGATGCCATTATATGACCGTATATCTGTTTCATACTACGAACTTATTCGTGCAACTACAAACTTCAGCGAGGAAAATTTACTGGGGAAAGGAGGATTTGGTTCTGTGTTCAAAGGAATTCTTGATAGTGGACTGACTATAGCAGTAAAAGTGTTAGATTTAAATCACGATGAAGCTTCCAAGAGCTTTGAGACTGAGTGCCAAGTTTTAAGATCGGTCAGACATAAAAATTTGTTAAAAACCATCAGTGTGTGCTCCAACTTAGATTTCAAAGCTATAGTTCTTGAATATATGCCAAATGGAAACCTTGAAAAATGGTTGCATTCGGATGAATATTTTATAACTCTTATGCAAAGACTTAGCATCTTGGTCGATGTAGCTGTAGCACTTGAGTACCTCCACCATCACCATCATCAAATTGTCCTGCATTGTGACTTGAAGCCAACTAATATTCTGTTGGATGATGAATTGGTAGCACATGTAAGCGATTTCAGCATTTCTAAGCTGCTTCTTGATGGCAATGCATCCATGGCAACTGCAAGCGTGCCCGGCACCATAGGATACATATCTCCAGAGTATGCTTCAAGTGGTGCAGTATCAAGAATGGGTGATGTTTACAGTTTTGGGATTCTAATGCTAGAAATGTTTACTGGGAAGAAACCAGATAGTGAAGTGTTTGGTGAACAATCCAGTTTGAGGGAGTGGATATGCATTTCTTATCCTGAGGATATTTTGAAGATAGTGGATAAAAGGGTACTCGATGACCTTAATGGTAATGAATGGACAGTCTCATGA

Protein

Gene

>Asa2G00007.1
ATGCTGCGGTCGCTTCGTTATATGATATTTGAGTCGAATTCTTTGACTGGTTCGATTCCTAGTAATTTTGGGAATATGAGTGTTTTGACCTATCTGGACCTCGGTAATAATCTTCTCACTGGATCTATACCCGGTTATTTTGGTAATTTCAGTTATTTACAGTATTTGTATCTTGATAATAACAAGTTATCTTCCCACATCCCTCAAAGCCTGTGGACTTCCAAGAGCCTTCTCGAGATTAACTTATCAAAAAATATGTTAAATGGTCCCCTTCCATTGCAAGAAGACATACTGCCTTTCTTGACCTTTATGGATCTATCAGAAAATCAATTGTCAGGGAACATTTTAAGCCTAGGAAAGCTTCAAATGCTCGACTATTTGGATATATCAAGTAATAGGTTTGATGGTCCCATTCCTGATTCATTCAGCGGACTTATTAGCATAACCGTGATGAATTTATCTCACAATATTTTGTCAGGAAAGATACCAAATTCCTTGTCAAATCTCTCTCATCTTCAAATCCTTGACCTTTCTCATAATAACTTGACAGGACAAGTACCAAAGGGCAGAATTTTCTTAAATTCTAACACCACAATTTTGTCTGGAAACAAAGGGCTTTGTGGCGCTTTTCAGTTTAGCCTTAAGAACTGTGAATCTTTTTCTGTAAAAGTTAAGTCGGTGAAGAGACTAATAGTACTGAAATATGTTCTACCATCACTGGTTGCCTTAATCGTGGTAATTCTTCTCTGCATATGTCTTATATATGCATTTTGCTCGAAAAGGAAGCAAAAGAGTTTGATTCAAACAAACGAGATGCCATTATATGACCGTATATCTGTTTCATACTACGAACTTATTCGTGCAACTACAAACTTCAGCGAGGAAAATTTACTGGGGAAAGGAGGATTTGGTTCTGTGTTCAAAGGAATTCTTGATAGTGGACTGACTATAGCAGTAAAAGTGTTAGATTTAAATCACGATGAAGCTTCCAAGAGCTTTGAGACTGAGTGCCAAGTTTTAAGATCGGTCAGACATAAAAATTTGTTAAAAACCATCAGTGTGTGCTCCAACTTAGATTTCAAAGCTATAGTTCTTGAATATATGCCAAATGGAAACCTTGAAAAATGGTTGCATTCGGATGAATATTTTATAACTCTTATGCAAAGACTTAGCATCTTGGTCGATGTAGCTGTAGCACTTGAGTACCTCCACCATCACCATCATCAAATTGTCCTGCATTGTGACTTGAAGCCAACTAATATTCTGTTGGATGATGAATTGGTAGCACATGTAAGCGATTTCAGCATTTCTAAGCTGCTTCTTGATGGCAATGCATCCATGGCAACTGCAAGCGTGCCCGGCACCATAGGATACATATCTCCAGGTaactatattcaaattcatatttatttatttaattttagcaTTTGTATATCCACTAACAGTCTGTGCATGACCATAACAGAGTATGCTTCAAGTGGTGCAGTATCAAGAATGGGTGATGTTTACAGTTTTGGGATTCTAATGCTAGAAATGTTTACTGGGAAGAAACCAGATAGTGAAGTGTTTGGTGAACAATCCAGTTTGAGGGAGTGGATATGCATTTCTTATCCTGAGGATATTTTGAAGATAGTGGATAAAAGGGTACTCGATGACCTTAATGGTAATGAATGGACAGTCTCATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020265860.1	5.7e-94	LRR receptor-like serine/threonine-protein kinase EFR
Swissprot	Q9SD62.1	1.2e-59	Putative receptor-like protein kinase At3g47110
trEMBL	A0A6J0PEX9	4.1e-86	receptor kinase-like protein Xa21

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G47570.1	41.27	3e-106	382		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G00007	AT3G47570.1	550	290	11	2	523	408	952	41.27	3e-106	382
Asa2G00007	AT3G47570.1	238	126	5	13	217	100	335	32.35	2e-19	94.0
Asa2G00007	AT3G47570.1	173	110	1	15	186	78	250	35.84	7e-19	92.4

Ortholog group

Species	Genes
Allium cepa	g106355.t1
Allium fistulosum	AfisC5G05346; AfisC5G05357; AfisC6G01040
Allium sativum	Asa0G01399.1; Asa0G01592.1; Asa2G00007.1; Asa2G00104.1; Asa2G04401.1; Asa2G04414.1; Asa2G04419.1; Asa2G04421.1; Asa2G04433.1; Asa2G04437.1; Asa2G04438.1; Asa2G04442.1; Asa2G04451.1; Asa2G04488.1; Asa2G04619.1; Asa3G01133.1; Asa3G02093.1; Asa6G05583.1
Arabidopsis thaliana
Oryza sativa	LOC_Os01g49910.1; LOC_Os01g49920.1; LOC_Os02g30540.1; LOC_Os04g13640.1; LOC_Os10g13970.2; LOC_Os11g46960.1; LOC_Os11g47170.1; LOC_Os11g47210.1; LOC_Os11g47240.2; LOC_Os11g47300.1; LOC_Os11g47310.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13855.3	LRR_8	Repeat	3	63	39.1	4.3e-10
PF13855.3	LRR_8	Repeat	124	182	42.3	4.2e-11
PF00069.22	Pkinase	Domain	293	497	143.1	9e-42

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13420	FLS2; LRR receptor-like serine/threonine-protein kinase FLS2	EC:2.7.11.1	MAPK signaling pathway - plant	ko04016
K13420		EC:2.7.11.1	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network