Detail information of Asa2G00230


Location
GeneChrStartEndStrand
Asa2G00230chr2109281509109296734-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPSR89417.16.2e-80Auxin response factor 2 like
SwissprotK4DF01.11.2e-77Auxin response factor 2B
trEMBLA0A5J5P0Q28.4e-79Auxin response factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G62000.146.601e-79 293ARF1-BP;ARF2;HSS;ORE14auxin response factor 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag217873.t1; g32989.t1
Allium fistulosumAfisC2G04430
Allium sativumAsa2G00230.1; Asa6G02049.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family22332455.24.5e-15
PF06507.10Auxin_respFamily35043176.01.9e-21

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009725Presponse to hormone

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14486K14486, ARF; auxin response factorEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.