Detail information of Asa2G00410


Location
GeneChrStartEndStrand
Asa2G00410chr2146198881146200008+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrGER25886.14.9e-52zinc finger CCCH domain-containing protein
SwissprotQ9XEE6.11.0e-49AtSZF2
trEMBLA0A0B2R2U15.7e-50Zinc finger CCCH domain-containing protein 30

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G40140.136.183e-50 195ATSZF2;CZF1;SZF2;ZFAR1zinc finger (CCCH-type) family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag223765.t1; g223771.t1
Allium fistulosumAfisC3G00272; AfisC3G00277
Allium sativumAsa2G00410.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
-------

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15172SUPT5H, SPT5; transcription elongation factor SPT5EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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