result

Gene information

Detail information of Asa2G00577

Location

Gene	Chr	Start	End	Strand
Asa2G00577	chr2	182305081	182306762	-

Sequences

CDS

Protein

Gene

>Asa2G00577.1
ATGTCTGCAGCAACAAAGCATGATAAAGCTTCCACCTTCGCCATGACCTGCAACCTTCTCAGCCAGTTCATCAAAGAAAAGGGCTCGCTCGGCGATCTCGGACGCGAATTGGCTATCGGTACCTTTTTCCCACCAAATCATACCTTTTATTCCCTGCTTATTCTAGATCTGAAATCTTCTCGTGTTTGGATCCAGTTATATAATCTTCTTTTATAATGTTTTTAGGCGCAAGCGCTACGTACCGGCCACCAACTACGATGAACCTGCTACAAAGCGTGGATGCATCGGGGACTGCTGCTGCGAAAGAAAACGTATCGGAGCGAAACTGTACGAAACCCATTGATTTGTTTCCTCAAGAAGCTGAAAAAAGGTTTGTatacgattttttttttctttttttttagatcGGTCTCTTGAACTGGAAAGAAAGCAAGAAAAGTTTGCGTTTGTGTTTATGCTTCTGAATTTGTAAATGCAGAAAGCCTGGAAGCTCGCAATTGACCATATTTTACGGAGGGAAAGTGATGGTGTTTGATAATTTTCCTGCAAATAAGGCAAATGATTTGATGATGCTCGCAGGAAAAGGATGTGATCTGAAATCGGAGAAATTTAAAGCTGCAAATTCAAATTTGGTTGCTGCACCTGCTAACGGTCCAGTTGTGCAACCAGTATCCGTCCAAACTGTGGCTTCTGGTAAATTTATCACTCTTCTCATACTCATAGTTTAAGGTtcatataagtttaaaaaaaaaacaccgTTTAACCTTTGATTTCATCTCTGATTTCATGACTCAAGGATCTAGATTATCAGACTAGCTAATATATGTTGTTCATTCAAATCCTTGTCCCGCCGGAAGGCTTAAATGACGATGGTGTAAACGAGCTATTATTCATCATGGGCTAAATGACAGGCTAAAATGAGTTGATTAAGGTGGGAAAATTATAAGAAAATTTAATTATGTTTCTACATACTTTCATTTGAGGTGAGAAACTAGAACAGGTAGTAGATCTTATAATCTTAGAGCTCATATGGCAGCagcttatttcaaatatttttttatctagTTTTGAATAGTAACACTTGTTAGTAGTTTTGAATGAATATCATTAGATTAACTTGTTAGATGAGCTAAAATTAGGGTAAAACTTAGTTATGAAATTTAAAGTAAGTCATCTACTTGTTTGATTCCTTCAGGCTTCAACTGAAGACTTAAGTTGTTGCCAAACATTTCAATTTGTAAAAGCAACTTATTAGCTACTTTTGGTGCTTGTTATTGCCAAACGACCTGCTTTGAGCATAGCATATATATGTacccaaatatgtatatatgtataataatgtATTCACTTTTGCTGTGTTCATGTGGATAAATTTTGGTATTCTATATCTAAATTTGAGCAAAGATTAATCTGTATCTTTTCATTACAACAGATCTACCCATTGCAAGAAAAGCTTCGCTGCATCGATTTCTTGAGAAGAGGAAGGATAGGTAATCAACTCTATTTCTAAGTAAAATAAAATCCAACAATGCTAACATTTTTATCCAATTTGAATGCTTATACATTACCTTTTAATTTGCAGGATTAATGCTAAAGCGCCATATCAAATAAACCAAAAGAAAGATTTAGGAAACAAGGAAGAGAACCAGCCATGGCTTGCACTGACCCCTACCCTTGATTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020694311.1	2.1e-44	protein TIFY 10a
Swissprot	Q8H395.1	4.5e-31	OsJAZ6
trEMBL	A0A8T3AHT8	2.4e-45	Protein TIFY

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G74950.1	37.82	5e-32	134	JAZ2;TIFY10B	TIFY domain/Divergent CCT motif family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G00577	AT1G74950.1	238	97	8	12	205	17	247	37.82	5e-32	134
Asa2G00577	AT1G19180.1	239	102	9	9	206	19	249	36.82	5e-27	117
Asa2G00577	AT1G72450.1	207	102	8	11	190	10	213	36.23	5e-22	100

Ortholog group

Species	Genes
Allium cepa	g121422.t1; g143550.t1; g175586.t1; g199998.t1; g321095.t1; g524015.t1; g526236.t1; g529623.t1; g537452.t1
Allium fistulosum	AfisC1G03921; AfisC2G07008; AfisC3G00614; AfisC3G01670; AfisC3G03920; AfisC4G02030; AfisC4G02950; AfisC5G03580; AfisC8G00209; AfisC8G00621; AfisC8G00783
Allium sativum	Asa1G04293.1; Asa1G04294.1; Asa2G00577.1; Asa3G02593.1; Asa4G01696.1
Arabidopsis thaliana	AT1G19180.1; AT1G19180.2; AT1G74950.1
Oryza sativa	LOC_Os03g28940.1; LOC_Os03g28940.2; LOC_Os07g42370.1; LOC_Os07g42370.2; LOC_Os07g42370.3; LOC_Os09g26780.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF06200.11	tify	Domain	90	122	61.6	2.7e-17
PF09425.7	CCT_2	Motif	162	187	55.5	3.3e-15

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13464	JAZ; jasmonate ZIM domain-containing protein	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network