Detail information of Asa2G00700


Location
GeneChrStartEndStrand
Asa2G00700chr2207959032207966286-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008797762.13.1e-104PHD finger protein ALFIN-LIKE 3-like isoform X3
SwissprotB8BJV8.12.4e-93PHD finger protein ALFIN-LIKE 8
trEMBLA0A8B7CER32.2e-104PHD finger protein ALFIN-LIKE 3-like isoform X3

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G20510.165.818e-92 333AL5alfin-like 5

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag305005.t1; g377275.t1; g74834.t1; g96987.t1
Allium fistulosumAfisC2G01614; AfisC3G00740; AfisC5G03935; AfisC8G00644
Allium sativumAsa1G04269.1; Asa1G04270.1; Asa2G00700.1; Asa3G02545.1; Asa4G05868.1
Arabidopsis thalianaAT1G14510.1; AT2G02470.1; AT2G02470.2; AT3G11200.1; AT3G42790.1; AT5G20510.1; AT5G26210.1
Oryza sativaLOC_Os01g66420.1; LOC_Os01g66420.2; LOC_Os04g36730.1; LOC_Os05g34640.1; LOC_Os07g41740.1; LOC_Os11g14010.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12165.5DUF3594Family12139217.04.3e-65
PF00628.26PHDDomain21426241.39.5e-11

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0042393Fhistone binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11728BPTF, E(bx); nucleosome-remodeling factor subunit BPTFEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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