result

Gene information

Detail information of Asa2G00752

Location

Gene	Chr	Start	End	Strand
Asa2G00752	chr2	219570913	219573548	-

Sequences

CDS

>Asa2G00752.1
ATGCTGCTTCGTCACCTCCCACTCATTCTCGCCACCTTTCTCCTCCTCTCTCCCCTCTCCTTCACCTCCGACCTCGACACCGACCGCGCCGCTCTTCTCTCATTCCGCTCCGTCATCTCCTCCTCCTCCCGCATGTCCAACTGGAACCCGTCCGCCTCCCCGTGCTCCTTCGACGGCGTTCGGTGCGAAAACGGCCGCGTCACCTCCCTCCGCCTCCCCAACTCCGGATTGTCTGGCTCCATCCCTTCGGGAACGATTGGGAACCTCACCGCTCTGCGTGTTTTAAGCCTTCGGTTAAATTCCCTCACTTCTCTTCCTGATGACATGGGAAATCTTGTTGAACTGAGGTCTCTTTTCCTTCAGTACAATTCGATCGGTGGGGAGATTCCGAGTTCGATTTCGAAATTGATTAATTTGATCAGATTGGATTTATCGCATAACAAGTTTACTGGTGGAATTCCGGTCAATTTGAAGAACTTGAAAAGATTGGGAACTTTATACTTGGAAAATAATGCTTTAACTGGCCAAATTCCTGATCTCAGTCTTCCCAGATTGGAGTTGTTTAATGTTTCTTACAATAGTATAAATGGTTCTATACCAAGGTTCCTTGAAAAGCAACCGGCAAACGCTTTTTTGGGCATCAATGGCTTGTGTGGTGGGCCTTTCCAGCCTTGTATGGAAGCTCCTTCTCCTTCTCCAGCAACTGAAGGGCCTGCGTCCGAGCCACCTGGGGAAGAAGGTGCCAAGAAACATAAGATTTCAGGTGGAGCAATAGCAGGTACAGTAATTGGGTGTGCAGTTGGATTCTTGATTATATTGCTGTTGCTATTTTATTCATGCCGGAGAACAAAAGCACCAAAAGCGATAGAAAGTACTTCCAGAGCGGCTCCTACGAAACCAATAGAAGGAGAATTAGTGGAGCCTGCTGTTTTGGCCACAGAGGTTTCAAGAAGGAAGAATTTGGACAGTGGAGGGCGAAATGCGAAGACATTAGTGTTTTTCAATGATGGTGGAAATGAAGGATATAGCTTGGATGATCTGTTGAAGGCTTCGGCCGAGGTTTTGGGGAAGGGTAGTTTTGGAACTACGTATAAGGCGGTACTTGAGAAGGGGGTCACGGTTGTAGTTAAACGATTGAAGGATGTGAATTTGGATGAGAAGGAGTTGAAGCAGAAGATCGAGGTGCTCGGGAAGATGAATCATGAGAATTTGGTGCCGCTCAAGGCTTATTATTTTAGCAAGGATGAGAAGCTTCTTGTGTATGAGTACATGCCTTTGGGAAGCTTGTCCTCGATGTTACATGGCAACCGAAACGTAGGACAGAGCTCACTCAACTGGTCAACCAGAGCATCAATAGCCCTATCCTCCGCCCGAGGCCTATCTTATATTCACTCAACAAGCCCCACATCATCCCATGGAAACATAAGGTCCTCCAACATACTTCTCGGTAGATCCATCGAGGATGCCCGTGTATCTGATCACGGACTAGCAAACCTTATAGGGCACGCCCTAGCCCCTGCGCGTGCTACAGGGTATCGCGCTCCAGAAGTGACCAACCTCAAAACCATATCCCAGAAAGCAGATGTGTACAGCTTCGGCATCCTTCTACTAGAGCTGCTCACTGGCAGAGCGCCCTTACAGCCTACCATGAACGAGGAAGGGGTTGATTTACCGAAATGGGTACGGTCCATCATGCAGGAGGAGCAGACCTCCAAGGTGTTCGATCAGGGGCTGGCGAGGGATGGAAGCGTCGAGGAGGAAAGTATGCAGCTTTTGAAGCTGGCGCTGGATTGCACTGCTCAGGTTCCAGATAGCAGGCCGACCATGCCTCAGGTTGTTTCTGGAATTGAAGTCATTTGCCGCAATCTGAGGATGACTGAATTGGCAGTTGAGTGA

Protein

Gene

>Asa2G00752.1
ATGCTGCTTCGTCACCTCCCACTCATTCTCGCCACCTTTCTCCTCCTCTCTCCCCTCTCCTTCACCTCCGACCTCGACACCGACCGCGCCGCTCTTCTCTCATTCCGCTCCGTCATCTCCTCCTCCTCCCGCATGTCCAACTGGAACCCGTCCGCCTCCCCGTGCTCCTTCGACGGCGTTCGGTGCGAAAACGGCCGCGTCACCTCCCTCCGCCTCCCCAACTCCGGATTGTCTGGCTCCATCCCTTCGGGAACGATTGGGAACCTCACCGCTCTGCGTGTTTTAAGCCTTCGGTTAAATTCCCTCACTTCTCTTCCTGATGACATGGGAAATCTTGTTGAACTGAGGTCTCTTTTCCTTCAGTACAATTCGATCGGTGGGGAGATTCCGAGTTCGATTTCGAAATTGATTAATTTGATCAGATTGGATTTATCGCATAACAAGTTTACTGGTGGAATTCCGGTCAATTTGAAGAACTTGAAAAGATTGGGAACTTTATACTTGGAAAATAATGCTTTAACTGGCCAAATTCCTGATCTCAGTCTTCCCAGATTGgagttgtttaatgtttcttacaATAGTATAAATGGTTCTATACCAAGGTTCCTTGAAAAGCAACCGGCAAACGCTTTTTTGGGCATCAATGGCTTGTGTGGTGGGCCTTTCCAGCCTTGTATGGAAGCTCCTTCTCCTTCTCCAGCAACTGAAGGGCCTGCGTCCGAGCCACCTGGGGAAGAAGGTGCCAAGAAACATAAGATTTCAGGTGGAGCAATAGCAGGTACAGTAATTGGGTGTGCAGTTGGATTCTTGATTATATTGCTGTTGCTATTTTATTCATGCCGGAGAACAAAAGCACCAAAAGCGATAGAAAGTACTTCCAGAGCGGCTCCTACGAAACCAATAGAAGGAGAATTAGTGGAGCCTGCTGTTTTGGCCACAGAGGTTTCAAGAAGGAAGAATTTGGACAGTGGAGGGCGAAATGCGAAGACATTAGTGTTTTTCAATGATGGTGGAAATGAAGGATATAGCTTGGATGATCTGTTGAAGGCTTCGGCCGAGGTTTTGGGGAAGGGTAGTTTTGGAACTACGTATAAGGCGGTACTTGAGAAGGGGGTCACGGTTGTAGTTAAACGATTGAAGGATGTGAATTTGGATGAGAAGGAGTTGAAGCAGAAGATCGAGGTGCTCGGGAAGATGAATCATGAGAATTTGGTGCCGCTCAAGGCTTATTATTTTAGCAAGGATGAGAAGCTTCTTGTGTATGAGTACATGCCTTTGGGAAGCTTGTCCTCGATGTTACATGGTAAGTTTTCCTTTAGATGTTTATAACAGTGTTAAATTCacctgatttattttaattttaacgagaTAGATTGTTAttgtgaaaaatatttttaaaaaaaaaaatgataatgttAAGCTTCAACTTGTGTAGGTTGTAGATCTTTAGTGGCTCAGAGTATTTTGTAGGTTCTGTTTGAACTTTAAACATGACAAATTTGAAACTGGAGTTGGATGGAGACTGATATCACTAGGGGACGCGCTCAATGTACAATTATTAAGTAGGATACCTGATACACACATGTTTTTGCAACTCACCTGTCGCATTCACATTACACACTACCAAAAAATGGGACTATGCATGTATCATTGTTTTATGTTCTTGCACTATTATTGCATGAATACAAGCATGTAAACAAAAAATATAAGAAGAATCATGAGCACACTCTTGGGTGAAAGTGTTTAGCATTGTCAAGAATAATCATGTCGACGTTTTAGGACTCCTTAAACTAATTTTTCTAATGTGGGTTTCTAATTCGACCATTAAAACAAGGCCTTTTTTCCTTGAAATTGGTACTTTATATACTTGTTTTACGTAATATACACATATTACATGGCAAATGGATTCGACCAGGCAAGACAGAAATTGAATCAATGACCTCTTGCATTATGCCTAAGTGCCTTAACCAGTTTGGAACAAGGTGCTtgtgttcttttttctttttggaaacaTTGTCAGGAAATATTTATACACTTTGACAGGCAACCGAAACGTAGGACAGAGCTCACTCAACTGGTCAACCAGAGCATCAATAGCCCTATCCTCCGCCCGAGGCCTATCTTATATTCACTCAACAAGCCCCACATCATCCCATGGAAACATAAGGTCCTCCAACATACTTCTCGGTAGATCCATCGAGGATGCCCGTGTATCTGATCACGGACTAGCAAACCTTATAGGGCACGCCCTAGCCCCTGCGCGTGCTACAGGGTATCGCGCTCCAGAAGTGACCAACCTCAAAACCATATCCCAGAAAGCAGATGTGTACAGCTTCGGCATCCTTCTACTAGAGCTGCTCACTGGCAGAGCGCCCTTACAGCCTACCATGAACGAGGAAGGGGTTGATTTACCGAAATGGGTACGGTCCATCATGCAGGAGGAGCAGACCTCCAAGGTGTTCGATCAGGGGCTGGCGAGGGATGGAAGCGTCGAGGAGGAAAGTATGCAGCTTTTGAAGCTGGCGCTGGATTGCACTGCTCAGGTTCCAGATAGCAGGCCGACCATGCCTCAGGTTGTTTCTGGAATTGAAGTCATTTGCCGCAATCTGAGGATGACTGAATTGGCAGTTGAGTGa

Functional annotation

Database	accession number	e-value	annotation
nr	CDO98323.1	2.5e-133	unnamed protein product
Swissprot	Q9LP77.1	2.5e-114	Probable inactive receptor kinase At1g48480
trEMBL	A0A068TSJ5	1.8e-133	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G48480.1	51.60	3e-168	588	RKL1	receptor-like kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G00752	AT1G48480.1	624	271	15	22	624	30	643	51.60	3e-168	588
Asa2G00752	AT3G17840.1	615	271	15	24	617	30	636	51.22	9e-157	550
Asa2G00752	AT3G02880.1	621	290	12	4	619	5	615	50.89	3e-156	549

Ortholog group

Species	Genes
Allium cepa	g450227.t1
Allium fistulosum	AfisC3G00845
Allium sativum	Asa2G00752.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	26	62	41.9	7.8e-11
PF13855.3	LRR_8	Repeat	67	125	33.2	2.9e-08
PF00560.30	LRR_1	Repeat	138	160	12.5	0.15
PF00069.22	Pkinase	Domain	353	613	127.2	6.5e-37

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network