result

Gene information

Detail information of Asa2G00855

Location

Gene	Chr	Start	End	Strand
Asa2G00855	chr2	252403880	252405511	+

Sequences

CDS

Protein

Gene

>Asa2G00855.1
ATGATTTTATCACCACTGACCAACCCCTCGTATGTGCTTTCCCCCCCTGGTGATTTTGCTTTGGGTTTCCATGCACTTGATACTGATCCCACGCTCTTTTTTCTTGCTATCTACCACAACAAAATCAGGGGAAAAACTGTAATATGGACTGCAAATGGAGACAATCCGGTGTCGAACAAATCCACAGCTCAGCTTACATCAGATGGCCAACTGACCTTACAAGAGTCATCGAACCTACAGATTTGGAGTTCAAATTCCAGTGGAGCAAGCTACGGTTCTATGCAAGATGATGGAAATTTCATACTCTACTTCAGTTGCTCTTCCGTTGTATGGCAGTCATTTGATTATCCTACCGATACTATATTGCCTGGTCAAATATTGGAACAAAATACGGTGATGTTCTCGAAGCTTACAGACGATGATTATTCAAAAGGGAGATTCAAGTTTATTATGCAGCTCGATGGAAATTTAGTTTTGTATCAAGTGGATTTTCCGGCACAAACCGATCAAGACAACGCCTTTTATACTACAGGCACACAAGATAATCCAGGAACTAGCCTTGTGTTTAATCAGACTGGAAGTTTGTACGTTTCTTTTACCAATGGCTCTACAAAAGAAGTGCTAAAAGAACCAAATGTAGCTGGAGCCAACTATTTGAGAGCAACTTTGGACCCAGATGGTGGTTTCAGGTTTGCTTTATACATACATGGATATATAGACACACACGTACATACATtcacatcatatacatatatacatagagagAGACACACACGAAAATGCTGCAGTAACCGGAAAGGAGTACGTCGTTTCCTGAGGAAGTGAAAATGGTCATTGGATATTTTACTCCCTCTGAGTTACACTCGTTCAATCTCGGATCCGTTCGTCTTCACCGTTTTTATTTCGGTCGATGTagcattcttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgggccggctagacacaaaattaaacacacacaGAGAGACCTAAAGCCTCTactgttggatttgtttgtctttatatggagagtgtaattcatggaaggatccaatagttgagatttattttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataatatatacacacacagagctGAGTAATTCCACTTCTTACAACAATTAGTTAAATGTTTCAGGCAGTACTCCTTTCCAAAGGCGCAGCTAAGCACTGGAAGTTGGAGTATTGCAGCAAATCTTGTCCAAGATCTGTGCTCAATCTTCGTATTTAAGTTTGGAAGTGGAATATGTGGCCCCAATAGTTACTGCACAAAATATGACAATGGACTAATCAATTGTCAGTGTCCTCCTCGCTACTCTTTCATAGACCCAAACAGAAAATACAAAGGTTGCAAACCGGATTTCATTCCCCAACTCTGCGAACAAGGCGGTGGATCAACTtccggttttgaaatcgttaagcATATGGATTGGCCATCATATGGAGCCAAAAAGCTTACTCCGTTTAATGAAACTCAATGCCAAAATGAATGCTTGAATGATTGCTTTTGTTTGGCTGCTACCTAA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK79732.1	1.0e-94	uncharacterized protein A4U43_C01F9500
Swissprot	A0A075F7E9.2	5.4e-69	OsRLCK134
trEMBL	A0A5P1FNN8	7.2e-95	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G60900.1	31.04	5e-43	171	RLK1	receptor-like protein kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G00855	AT5G60900.1	364	197	9	14	357	52	381	31.04	5e-43	171
Asa2G00855	AT1G65790.1	370	215	17	12	356	44	384	27.30	2e-19	93.6
Asa2G00855	AT4G21380.1	371	221	15	12	356	46	390	26.42	6e-19	92.0

Ortholog group

Species	Genes
Allium cepa	g126559.t1; g210181.t1; g375190.t1; g520617.t1; g520618.t1; g520640.t1; g520641.t1
Allium fistulosum	AfisC1G06789; AfisC3G01252; AfisC3G01258; AfisC3G01260; AfisC3G01267; AfisC3G01268; AfisC3G01277; AfisC3G01279; AfisC3G01283
Allium sativum	Asa2G00855.1; Asa2G00856.1; Asa2G00860.1; Asa2G00862.1; Asa2G00865.1; Asa2G00867.1; Asa2G00869.1; Asa2G00870.1; Asa2G00876.1; Asa2G00882.1; Asa2G00883.1; Asa2G00885.1; Asa2G00888.1; Asa2G00889.1; Asa2G00892.1; Asa2G00902.1; Asa2G00903.1; Asa2G00904.1; Asa2G00905.1; Asa2G05713.1
Arabidopsis thaliana	AT5G60900.1
Oryza sativa	LOC_Os01g73370.1; LOC_Os04g12540.1; LOC_Os04g12560.1; LOC_Os04g12580.1; LOC_Os04g12600.1; LOC_Os04g39910.1; LOC_Os04g39930.1; LOC_Os06g41510.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	45	130	82.8	1.4e-23
PF08276.8	PAN_2	Domain	315	356	22.5	8e-05

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00276	AOC3, AOC2, tynA; primary-amine oxidase	EC:1.4.3.21	Glycine, serine and threonine metabolism	ko00260
			Tyrosine metabolism	ko00350
			Phenylalanine metabolism	ko00360
			beta-Alanine metabolism	ko00410
			Isoquinoline alkaloid biosynthesis	ko00950
			Tropane, piperidine and pyridine alkaloid biosynthesis	ko00960

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network