Detail information of Asa2G01302


Location
GeneChrStartEndStrand
Asa2G01302chr2370431628370445335-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020257693.13.9e-87homeobox protein HOX1A-like
SwissprotQ8H991.14.6e-69Homeobox protein HOX1A homolog
trEMBLA0A5P1FBW12.8e-87Homeobox protein HOX1A

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G19510.152.312e-65 248HAT3.1Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain

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Ortholog group
SpeciesGenes
Allium cepag287598.t1
Allium fistulosumAfisC3G01492
Allium sativumAsa2G01302.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00628.26PHDDomain45651140.02.3e-10
PF00046.26HomeoboxDomain70875139.33.7e-10

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0008270Fzinc ion binding
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11657RSF1; remodeling and spacing factor 1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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