Detail information of Asa2G01330


Location
GeneChrStartEndStrand
Asa2G01330chr2378375310378376182-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPON87052.11.6e-87AP2/ERF transcription factor
SwissprotQ8RZX9.13.1e-83AP2/ERF and B3 domain-containing protein Os01g0693400
trEMBLA0A2P5ENH51.2e-87AP2/ERF transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G68840.160.624e-85 311AtRAV2;EDF2;RAP2.8;RAV2;TEM2related to ABI3/VP1 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag111307.t1; g131870.t1; g134243.t1; g210255.t1; g210259.t1; g210847.t1; g210849.t1; g25553.t1; g310330.t1; g360931.t1; g449553.t1; g465579.t1; g490616.t1; g492922.t1; g515745.t1; g53804.t1
Allium fistulosumAfisC1G05463; AfisC1G05464; AfisC1G05466; AfisC3G01429; AfisC3G01435; AfisC3G01443; AfisC5G01678; AfisC5G05944; AfisC6G00715
Allium sativumAsa0G01370.1; Asa2G01330.1; Asa4G05521.1; Asa5G00578.1; Asa5G00580.1; Asa8G05525.1
Arabidopsis thalianaAT1G13260.1; AT1G25560.1; AT1G68840.1; AT1G68840.2; AT3G25730.1
Oryza sativaLOC_Os01g04750.1; LOC_Os01g49830.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain176435.95.8e-09
PF02362.18B3Family14222699.11e-28

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09287RAV; RAV-like factorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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