Detail information of Asa2G01378


Location
GeneChrStartEndStrand
Asa2G01378chr2386905347386910522-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020240802.11.5e-82auxin-responsive protein IAA1-like
SwissprotQ5VRD1.17.0e-53Indoleacetic acid-induced protein 1
trEMBLA0A8B7D2B93.6e-78Auxin-responsive protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G04250.148.869e-48 186AXR3;IAA17AUX/IAA transcriptional regulator family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag249135.t1; g289321.t1
Allium fistulosumAfisC3G04933; AfisC5G04991
Allium sativumAsa2G01378.1; Asa6G05075.1
Arabidopsis thaliana
Oryza sativaLOC_Os01g08320.1; LOC_Os05g08570.1; LOC_Os05g08570.2; LOC_Os05g08570.5; LOC_Os05g08570.6

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02309.13AUX_IAAFamily379339.45.3e-10
PF02309.13AUX_IAAFamily93197172.99e-51

Gene Ontology
AccessionOntologyName
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14484IAA; auxin-responsive protein IAAEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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