Detail information of Asa2G01518


Location
GeneChrStartEndStrand
Asa2G01518chr2426532643426533167+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020256169.16.9e-49auxin-induced protein 22D-like
SwissprotO24542.11.6e-42Indole-3-acetic acid-induced protein ARG13
trEMBLA0A5P1FC295.0e-49Auxin-responsive protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G43700.151.726e-42 166ATAUX2-11;IAA4AUX/IAA transcriptional regulator family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag302941.t1; g320746.t1; g476192.t1; g514424.t1; g535321.t1
Allium fistulosumAfisC1G02447; AfisC1G06638; AfisC3G01629; AfisC3G07084; AfisC8G04518
Allium sativumAsa1G01158.1; Asa1G01167.1; Asa2G01518.1; Asa2G01519.1; Asa2G01520.1; Asa2G01524.1; Asa2G01525.1; Asa2G01526.1; Asa2G05880.1; Asa7G03113.1
Arabidopsis thalianaAT1G04240.1; AT3G23030.1; AT4G14560.1; AT5G43700.1
Oryza sativaLOC_Os12g40900.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02309.13AUX_IAAFamily4411881.86.1e-23
PF02309.13AUX_IAAFamily12016175.64.7e-21

Gene Ontology
AccessionOntologyName
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0046983Fprotein dimerization activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14484IAA; auxin-responsive protein IAAEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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