Detail information of Asa2G01742


Location
GeneChrStartEndStrand
Asa2G01742chr2484645340484647605+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAGO81841.16.8e-96indterminate-like protein, partial
SwissprotQ9SCQ6.17.3e-87Protein indeterminate-domain 2
trEMBLS4VUR14.9e-96Indterminate-like protein (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G66730.151.371e-113 406ENY;IDD1C2H2-like zinc finger protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag529725.t1
Allium fistulosumAfisC3G02095
Allium sativumAsa2G01742.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12171.5zf-C2H2_jazFamily608222.97.2e-05

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12309GLB1, ELNR1; beta-galactosidaseEC:3.2.1.23 Galactose metabolismko00052
Sphingolipid metabolismko00600
Glycosaminoglycan degradationko00531
Glycosphingolipid biosynthesis - ganglio seriesko00604
Other glycan degradationko00511
Lysosomeko04142

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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