Detail information of Asa2G01845


Location
GeneChrStartEndStrand
Asa2G01845chr2513277513513299541-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010940544.12.6e-81NAC domain-containing protein 53
SwissprotQ84K00.25.5e-60Protein NTM1-like 11
trEMBLA0A6I9SC311.9e-81NAC domain-containing protein 53

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G04410.164.773e-67 253anac078;NAC2NAC domain containing protein 2

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Ortholog group
SpeciesGenes
Allium cepag307554.t1
Allium fistulosumAfisC3G02283
Allium sativumAsa2G01845.1
Arabidopsis thalianaAT3G10490.1; AT3G10490.2
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily1414088.34.2e-25

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K13126PABPC; polyadenylate-binding proteinEC:- RNA transportko03013
mRNA surveillance pathwayko03015
RNA degradationko03018

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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