result

Gene information

Detail information of Asa2G02216

Location

Gene	Chr	Start	End	Strand
Asa2G02216	chr2	614189639	614190836	+

Sequences

CDS

Protein

Gene

>Asa2G02216.1
atggAAAGCCATTTTGGGTGGAGGTCTTGTGTCAGTGACGATGGGTGGCGGAAAGGGCCATGGACTCCTCAAGAAGACAAGCTTCTCACTGAACATGTTCATCTTCAAGGCGAAGGAAGGTGGAATTCTGTATCTCGCCTTACAGGTACAATATTTTACTTACAAAACATATATGTCTTATTAAGTCATGCAAGATACCATGTTTTATCTTCATTAGTGTGTACATCTCAATGATTGATTTTGTTTTTTGGGTAATTTTAGGATTGAAGAGGAGTGGAAAGAGCTGTAGGCTAAGGTGGGTGAACTACTTGAGGCCTGATCTCAAAAGAGGAAAGATAACACCAAACGAAGAGACTATCATTTTAGATTTGCATGCTAGATGGGGAAACAGGTGAATCAGTTTTTTGCAATTTGTTTTCCCATTTACAATTAAACTAGACTTAGTGCATTCATTGCTTGCACCACAATCTAAAAGGATTGGAGAGaaaatagttatgtatacaatatatAAGCAACTCAACTGATTGGTTGTAGCCTTCAGTAACTCTCTACGCAAGGACATAACttctaaatgtttaaattatacattttttagTGACGGGTTTGATTAGCAATAGTAATTGGTTAACCTTGGATGGGTGGCTAAGTgccttctaaatcaaatttggataataACTAAGGTAAAAGGTTCAAACCACAATCCCAGCATATAGTATATTAAGGTCGTATGTCATTCATTTTGTTTTTAGGAGTAAAATGGTTGCTTGAATAAATGAACAGATGGTCGACGATAGCAAAAAGCCTTCCGGGAAGGACTGACAATGAAATCAAGAATTACTGGCGAACACACTTCAAGAAAGGGAAATCCTCAAAGAACATTGAAAGGATTAGAGCCCACTTCCTTAGGCAACAGCAAGAGCAGAAGAAACTGCAATTTCAGCAAAGTAATGAACCGAAGCAGCAGCAAGTTCAAGAGGTTGCCACAGCTAAATGGACGAATATGCCTCTGGAAGTACATGCAGCTGAAATGTATCAAGACATACAAGATCTGACATATATGTTCCCTATGTCCTACATGCTTCTTCAAGAAAATGAAAATGCTGGTAGCTCAACAAGCGAAGAAGGTTCATTTGAGGATCAAATTCCAAATGCATGGGAGAATATATGGGACTTAGATGATCGAGATCTTTACTACTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020672048.1	2.6e-64	myb-related protein 305-like
Swissprot	Q9LX82.1	8.0e-42	Myb-related protein 48
trEMBL	A0A2I0X7W3	1.9e-64	Myb-related protein 305

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G13480.1	70.99	1e-51	199	AtMYB79;MYB79	myb domain protein 79

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G02216	AT4G13480.1	131	34	2	16	142	6	136	70.99	1e-51	199
Asa2G02216	AT3G24310.1	110	21	0	13	122	15	124	80.91	5e-51	197
Asa2G02216	AT3G30210.1	216	97	5	15	227	26	229	48.15	7e-47	183

Ortholog group

Species	Genes
Allium cepa	g157122.t1; g417000.t1; g417019.t1; g417037.t1; g417039.t1; g441901.t1
Allium fistulosum	AfisC1G01835; AfisC1G01836; AfisC1G01837; AfisC1G01841; AfisC3G02729; AfisC3G07009; AfisC3G08715
Allium sativum	Asa2G02216.1; Asa3G02380.1; Asa7G01669.1; Asa7G01672.1; Asa7G01673.1
Arabidopsis thaliana	AT3G24310.1; AT4G13480.1
Oryza sativa	LOC_Os02g40530.1; LOC_Os03g04900.1; LOC_Os04g42950.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	18	65	58.0	6.7e-16
PF00249.28	Myb_DNA-binding	Domain	71	115	53.3	2e-14

Gene Ontology

Accession	Ontology	Name
GO:0003682	F	chromatin binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09422	MYBP; transcription factor MYB, plant	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network