Detail information of Asa2G02812


Location
GeneChrStartEndStrand
Asa2G02812chr2755785424755786164-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAQR59357.14.0e-50proliferation cell factor-like protein 5
SwissprotQ9LSD5.19.2e-44Transcription factor TCP20
trEMBLA0A1S6EMY12.9e-50Proliferation cell factor-like protein 5

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G27010.149.372e-44 175AT-TCP20;ATTCP20;PCF1;TCP20TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag384123.t1
Allium fistulosumAfisC3G01388
Allium sativumAsa2G02812.1
Arabidopsis thalianaAT3G27010.1
Oryza sativaLOC_Os01g69980.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03634.10TCPFamily35138113.31.4e-32

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K16221TCP21, CHE; transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)EC:- Circadian rhythm - plantko04712

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.