Detail information of Asa2G03898


Location
GeneChrStartEndStrand
Asa2G03898chr210506221191050623117+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_022742417.14.0e-122zinc finger CCCH domain-containing protein 30-like
SwissprotQ10EL1.12.1e-115Zinc finger CCCH domain-containing protein 24
trEMBLA0A6P5YQ262.9e-122zinc finger CCCH domain-containing protein 30-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G41900.160.933e-121 431OXS2;TZF7CCCH-type zinc finger protein with ARM repeat domain

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag233782.t1
Allium fistulosumAfisC3G04702; AfisC3G04705
Allium sativumAsa2G03898.1; Asa4G01143.1; Asa4G01144.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12796.4Ank_2Repeat4211538.21.5e-09
PF00642.21zf-CCCHFamily24726726.24.9e-06

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K07560dtd, DTD; D-aminoacyl-tRNA deacylaseEC:3.1.1.96 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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