result

Gene information

Detail information of Asa2G04012

Location

Gene	Chr	Start	End	Strand
Asa2G04012	chr2	1080638690	1080641516	+

Sequences

CDS

>Asa2G04012.1
ATGTTACTACCTTTGTGCCATGGCTTGCTATTGTTTGTTCTATGTTCATTTTTCCTCCCTTCATTTGCTCTCGAGATTGGCTTTCCACGCTGTAGTTGCTTTGGTGAAAACTATTGGAGCATCGAAGGAATTCTCCAATGGCAAAAAGTTAGTGATTTTTTCATAGCAACAGCATATTTTTCTATTCCATTAGAGCTACTATACTTTGCTACGTGCTCGACTTTATTCCCGTTCAAATGGATTGTTATTCAATTTGGGGCATTCATTGTACTTTGTGGACTTACTCATCTCCTGAATGTGTTCACTTACGAGCCACATTCCTTTATGTTAATGCTAAGCCTCACCATATCAAAGTTTTTTACTGCACTTGTATCATTTGCCACAGCTATAACTCTCCTGACTTTAATTCCTCAGCTTTTGAGAATCAAAGTGAGGGAGAATTTTTTGAGAAACAAAGCAAGGGAATTGGATCGAGAAGTTGGTATGATGAAAATGCAAGAGGAAACACGTTGGCATGTTAGAATGCTTACTCAAGAAATAAGAAAGTCGCTGGACAGACATAAAATTTTGTACACTACTTTAGTTGAACTCTCGAAAACTCTAGGTTTGGAAAATTGCGCTGTTTGGATGCCAAGTGAGGATAGGACAGTGATGAACCTAACACATGAGCTGCAACAAAAAAGCTCTTCTGATCTGTATGCTCGTGCTATTCCTATTGATGATATAGATGTTCGTGTTATTAAAGGATCAACTGGTGCTATAATATTGAGACCTGAATCACTGCTAGCTTCTGCTAGCAGTGGTGGCTCTACTTTCGAATCAGGGCCTGTAGCTGCTATTCGAGTGCCAATGCTTAAAGTTTCAAATTTTAAAGGTGGGACACCTGAAATTGTACAAACTCATTATGCCATTCTAGTATTAGTTTTACCGGGAAATAATTCTAGGTTTTGGAGCGATCATGAGTTGGAGATAGTAGAAGTGGTGGCAGATCAAGTAGCAGTAGCCCTCTCTCATGCTGCGGTGTTAGAAGAATCGCAGTTAATGGCAGAAAAACTGGCTGAGCAAAATCGAGCTTTGTTACTCGAGAAGCAGAATGCTTTAATGGCTAGTGAAGCAAGAAATGCTTTTCAGAAGGTGATGAGTCAAGGCATGAGAAGACCTATCCATTCTATCATAGGCATATTATCTATGTTACAGCAAGATGATATGAGCAAAGAACAAAAGCTTAGTATAGACACGATGTGTAAAACTGGGTGTGTGGTTTCAGCCTTGATTAACGATGTGATGGAAATATCTTTGACTAATAATGATAGATTAACTTTAGAGATGAGAACGTTTAAGCTGCATTCTATGATTAAGGAGGCGGTTAGCGTTTCTAGGTCTCTTTGCGATTGTAGAGGTTTTAGGTTTGAGTTTCAGTGTGAAAACGTCGCGCCTGATACTGTTTTAGGCGATGAAAGGAGGATATTTCAAGTGATATTACATATGGTAGGAAGTTTATTGAATGGGAGTAATGAAGGAACCATAACATTAAAAATTAGTGGTTTTAATCAGGATACTGATAAGATGGATCAGGGTTGGGTTCCGTGGAAAGCAAGCTTCTCAGATGGGTATATTTGTGTGAAATTTGAGATTTCGATCAAGAGGATGCAGAATACTAATCCTACCGCATTAGTTCCAATTATTAGGCGCCCGAATTCTGAAGGTTTTGATATGGGACTTAGCTTCAACATGTGCAAGAATATTGTGCAGATGATGCAAGGAAATATTTGGGCCATACCCAATTCTCAAGGTCAACCTGAAACCCTAATTCTTCTACTACAACTTCAGACTCAATTACTGGATTCAATACCCGAACCCAACAGCTCTTTCAACAGCCACCAAGTTAGTTCGTCCGCCCCAATCTTCAAAAACCTCAGAGTCCTGCTTGCAGACGATGATGTTGTCAATAGAGCGGTAACAAGAAAGCTACTTGAAAAATTAGGCTGCCATGTCACCTCAGTCTCTTCAGGTATGCAATGCTTAAGCTCCATTAGCACATTCCGGAACTCCTCCGTTTCAACTCGTTGTGTTGGATTTGCACATGGATAA

Protein

Gene

>Asa2G04012.1
ATGTTACTACCTTTGTGCCATGGCTTGCTATTGTTTGTTCTATGTTCATTTTTCCTCCCTTCATTTGCTCTCGAGATTGGCTTTCCACGCTGTAGTTGCTTTGGTGAAAACTATTGGAGCATCGAAGGAATTCTCCAATGGCAAAAAGTTAGTGATTTTTTCATAGCAACAGCatatttttctattccattagagcTACTATACTTTGCTACGTGCTCGACTTTATTCCCGTTCAAATGGATTGTTATTCAATTTGGGGCATTCATTGTACTTTGTGGACTTACTCATCTCCTGAATGTGTTCACTTACGAGCCACATTCCTTTATGTTAATGCTAAGCCTCACCATATCAAAGTTTTTTACTGCACTTGTATCATTTGCCACAGCTATAACTCTCCTGACTTTAATTCCTCAGCTTTTGAGAATCAAAGTGAGGGAGAATTTTTTGAGAAACAAAGCAAGGGAATTGGATCGAGAAGTTGGTATGATGAAAATGCAAGAGGAAACACGTTGGCATGTTAGAATGCTTACTCAAGAAATAAGAAAGTCGCTGGACAGACATAAAATTTTGTACACTACTTTAGTTGAACTCTCGAAAACTCTAGGTTTGGAAAATTGCGCTGTTTGGATGCCAAGTGAGGATAGGACAGTGATGAACCTAACACATGAGCTGCAACAAAAAAGCTCTTCTGATCTGTATGCTCGTGCTATTCCTATTGATGATATAGATGTTCGTGTTATTAAAGGATCAACTGGTGCTATAATATTGAGACCTGAATCACTGCTAGCTTCTGCTAGCAGTGGTGGCTCTACTTTCGAATCAGGGCCTGTAGCTGCTATTCGAGTGCCAATGCttaaagtttcaaattttaaaggTGGGACACCTGAAATTGTACAAACTCATTATGCCATTCTAGTATTAGTTTTACCGGGAAATAATTCTAGGTTTTGGAGCGATCATGAGTTGGAGATAGTAGAAGTGGTGGCAGATCAAGTAGCAGTAGCCCTCTCTCATGCTGCGGTGTTAGAAGAATCGCAGTTAATGGCAGAAAAACTGGCTGAGCAAAATCGAGCTTTGTTACTCGAGAAGCAGAATGCTTTAATGGCTAGTGAAGCAAGAAATGCTTTTCAGAAGGTGATGAGTCAAGGCATGAGAAGACCTATCCATTCTATCATAGGCATATTATCTATGTTACAGCAAGATGATATGAGCAAAGAACAAAAGCTTAGTATAGACACGATGTGTAAAACTGGGTGTGTGGTTTCAGCCTTGATTAACGATGTGATGGAAATATCTTTGACTAATAATGATAGATTAACTTTAGAGATGAGAACGTTTAAGCTGCATTCTATGATTAAGGAGGCGGTTAGCGTTTCTAGGTCTCTTTGCGATTGTAGAGGTTTTAGGTTTGAGTTTCAGTGTGAAAACGTCGCGCCTGATACTGTTTTAGGCGATGAAAGGAGGATATTTCAAGTGATATTACATATGGTAGGAAGTTTATTGAATGGGAGTAATGAAGGAACCATAACATTAAAAATTAGTGGTTTTAATCAGGATACTGATAAGATGGATCAGGGTTGGGTTCCGTGGAAAGCAAGCTTCTCAGATGGGTATATTTGTGTGAAATTTGAGATTTCGATCAAGAGGATGCAGAATACTAATCCTACCGCATTAGTTCCAATTATTAGGCGCCCGAATTCTGAAGGTTTTGATATGGGACTTAGCTTCAACATGTGCAAGAATATTGTGCAGGTAAAGCTTTCTGCTCTTTGTTTtgctaatatattatattggatgtCATCTTATTtggactttatttatttatttatttattttttgacatTATAAGCATGATCTAGAAGTAGTTTATCAGACTTTGCAGTTTGTTATTTAAGCAAGGATGTCCAATCATTGCCATTGTTACACTTTAAAGTCATCAGCCTGTTTTTGCGTCGTCATAATTCATAAAATGAAATCTGTTTCACATGAAACTTTATAATCAACATATAGTATTAGCTTCACATGCCTCTTGCTTGCTTTGTAGCTGTTTATATCTATCTGCTAACACCGATTGTGTCACATGCCTTGCCTATTTTTGACTACGAGGCCGAAAACAAAATGGCTTAAAGCAACCACACCCACATATTGATTTCCACATAATAGGCAAGAGAaagttattaaaatgatttattgttGGGGAAGTTGAGATTGTCAAAGGCTTCATttgtttttaacataataattgCTTATGGCTATTAAGCATTCTTTGCAATAAACTGTTCCTGAATAGTCCTAAATTAAAGATTACGCACTCTGTTAGAGCTTTTTGCAATCCTTCATAGCTattaccttaaaaaaaaaaaaaaaaattgcttaacAGACGGACAGTTCTGACTGAAGTGAAATCAAACACACTTAACAATAATCagtatttatattgattattataagCTCAGCCTTGTATTTTGAATTAGTTTTGAATGTACAGATGATGCAAGGAAATATTTGGGCCATACCCAATTCTCAAGGTCAACCTGAAACCCTAATTCTTCTACTACAACTTCAGACTCAATTACTGGATTCAATACCCGAACCCAACAGCTCTTTCAACAGCCACCAAGTTAGTTCGTCCGCCCCAATCTTCAAAAACCTCAGAGTCCTGCTTGCAGACGATGATGTTGTCAATAGAGCGGTAACAAGAAAGCTACTTGAAAAATTAGGCTGCCATGTCACCTCAGTCTCTTCAGGTATGCAATGCTTAAGCTCCATTAGCACATTCCGGAACTCCTCCGTTTCAACTCGTTGTGTTGGATTTGCACATGGATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020261404.1	9.8e-280	ethylene receptor 2-like
Swissprot	Q7XX84.1	1.1e-208	OsPK1
trEMBL	A0A6I9S474	2.4e-256	Ethylene receptor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G04580.1	54.28	0.0	655	EIN4	Signal transduction histidine kinase, hybrid-type, ethylene sensor

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
Asa2G04012	AT3G04580.2	678	286	12	28	691	24	691	54.28	655
Asa2G04012	AT3G04580.1	678	286	12	28	691	24	691	54.28	655
Asa2G04012	AT3G23150.1	702	308	14	1	679	1	686	50.57	634

Ortholog group

Species	Genes
Allium cepa	g297487.t1; g36560.t1; g95130.t1
Allium fistulosum	AfisC1G08036; AfisC1G08445; AfisC3G00887; AfisC3G03615
Allium sativum	Asa2G04012.1; Asa7G06525.1; Asa7G06820.1
Arabidopsis thaliana	AT3G04580.1; AT3G04580.2; AT3G23150.1
Oryza sativa	LOC_Os02g57530.1; LOC_Os02g57530.2; LOC_Os02g57530.3; LOC_Os02g57530.4; LOC_Os04g08740.1; LOC_Os04g08740.2; LOC_Os04g08740.3; LOC_Os06g38130.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01590.23	GAF	Domain	185	336	43.7	3.6e-11
PF02518.23	HATPase_c	Domain	484	599	23.2	7.2e-05

Gene Ontology

Accession	Ontology	Name
GO:0000155	F	phosphorelay sensor kinase activity
GO:0000156	F	phosphorelay response regulator activity
GO:0000160	P	phosphorelay signal transduction system
GO:0005515	F	protein binding
GO:0016020	C	membrane
GO:0007165	P	signal transduction
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14509	ETR, ERS; ethylene receptor	EC:2.7.13.-	MAPK signaling pathway - plant	ko04016
K14509	ETR, ERS; ethylene receptor	EC:2.7.13.-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network