result

Gene information

Detail information of Asa2G04276

Location

Gene	Chr	Start	End	Strand
Asa2G04276	chr2	1163878975	1163883365	-

Sequences

CDS

Protein

Gene

>Asa2G04276.1
ATGAAGCTAGGTTGGGACCTGACTACAGGATTGGCCCATAACGTCACTTCCTGGAAATCCGAATCTGACCCATCTCCAGGCTCTTATACTCTTGCCATAGATATCCGTGGCGCTCACGAACTGTGCGAGTTCGATGGTACCAAACTGGTCTGGAGATCAGGAATGTGGAACGGGTTAGAGTTTAGTGGGTTGCCCGATTTCAAATCCTATGGAGACTACGACTTAACATTTGTAAACAACACTTCAGAGATATCGTTAATGTATGAAATGACCAACCCTTCAACGCTTGCTAGATCGGTAATCACGTACGATGGAATAGCGAATAGGTACATATGGGTCGAAAGTTCGGGTGCATGGAACTTAGTATGGTCTGCACCTAGTAGTAGGTGTGATAAGTACAATGTATGTGGGCCGAATGCTAAGTGCAACCCGAGCACGTTGCCTGTGTGTGAGTGTTTTCATGGGTTTGAGCCTAAAAGGCCAGCAGACTGGGCTTTGAGGGATACGGATGAAGGGTGTGTACGTAAGACTCGGCTGGACTGTAGGAATCAGACCGACCGGTTTTTTAAGATGCAGCATGTAGTGCTGCCTGATAGCTTAAGTGCAACCATTGATGCAAGTATTGCAAGTCTTGATGAGTGTAGAGAGAGTTGCTTGAAGAAGTGTTCGTGTACTGGGTTTGCAAATTCCGATGTGCGTTCTGGTGGAAGTGGTTGTGTTATGTTTGTTTCTGATCTTAATGATGTTGCTGATCTTGGGAATGATGGTCAAGATTTCTATCTCAGGTTGGCTGCGGCTGATGTAGGTGCGTcaaaaaatgtagttttattccCGTTACTAGACTTCAGTGCTTGAATACTATCTGTTTCCTAAAATATGTtcaaagcatttttttttttttaaatcccagacggataaaataaaatagttttaatccattcaaatagaaatcgatgattGATGAATAGATGCAACTGTTTGTGTTAAAACAGTTACATGTGTTCAAAAAATATGAGTAGTGACTAGTGAGTTTCAACTTTCAACAGCCATATACTCACTGTTTTGCTTTCTCGACTCCTGGATAGACAAGAAACTTTTGAGTGGACATAATCTAAAATTTATTCCATGTTATgaacaaacaattttcaaaaatttaatgtaTCATCACTATAATCTGCGAATAACATGTGGAATTTGACACAGTCGTGAAATGTAGgaaaataatattgaattttcTGTGGTCAACTTTGCAATACTattaattatctattttattattagttGAGTCACATTTTAAAACACATTACGCAGTTTCCTTCCCTGGAGGTAATTACTATTTTTTGATGTTTCGAGCTTAGAAGTCACACTATATAGTTTTTCCTAATGTTGGTTGAATTTGAAAAGATGAAGTACTTTTCAGCCCGTTATAAGATTAAACTAATACTTGATACAATGTTGAGTTATTTTTGGTATTATTGACTTAGCAATGTACCTTTTAAAATAGTGTGGTGCAAAGGGTATCCCAATacgttcttcctaataccgcaattaaaaaaatagtgtggtgctaagaaCTGTTCCTGTACTGGGTTTAGCTGGTTGATTGGTTTAAAAAATGAGGACAAACGAATATCGAGCAAAATAAAAATAGAGTAAAACAATGTAGTAGTCTCTACTTTTTGAGTGCGTGGttttaagaagagtgtaatactaattcttttggtattttttttagttgcggtattaggaatAACATATTAGGGTGCCTTTAGCACCACACTTAAAATATTTTAGGTGGAGAAGTTGCCATCACCAATGCATAATTTTGTATGCTTTTGCTGCTGGTTCTTTTGACTTTTAAATCTTCTGGTTGCACAACTCAAGCAACAATTTTTTATTAtctgtaaataataataaaaggtcAACACAGAAACATACACCTTTCATATTATGAAACTAGATATTTAGATTGGGTCTTGGAACTGCATAATTTGTTATGATTAAAGATCCCGATAACTGCAAAAATGTTCCACCTAGGAATTATTCAATCAGTCTCTTTAAGTCAGAAGCTATTATCCTTATTTTCATTTGCTTTCAGCATTGTAAGGCACCATAGAAATAAGTTCTTATCATTCAACATATTAAATTCCGttcaattcaaaaaataaaataaaaattgatgccTTAACAGCTATATCGCCGTCACCAAGCAATTCTAACAAGAAAGAGAGTAAAATCATTGCAACCACAGTGAGCCTTGTCATCGGGATTTTATTGCTTGCCTGCATCATGTACTGCATatgtagaaagaagaaaagaattagAAAAGGTACACTTGCATATTGATCACTTTTATATCTCATTTGATATGTGTATCTGCATGTGAATATCAGCAATTTTTTACTATCATTTGAGGGAAAATAATAACTCGGATTCATTATAATGTGGATGAGAACAATAGCATGTGATATAGATCTATATAATGCAGAGAACTGGAATGAGGAAAGCATAAGGAAAGATGAAGACCTAGAGTTACCATTATTTGATCTAGAGTCCATGGTTGTTGCAACTGATAATTTTGCAGTTGTTAATAAACTTGGAGAAGGTGGATATGGTCCAGTGTACAAGGTAGGATTACACACCTATTAGCGTTATTTATGGACTACCACATACCACTGCTTATGTTTAATGAAGAACAGTGCTAGTCACATGTTAAACATAACTGGTTGTAGCTGCATTCCTATCTCTAGACAAAAGATTGATGTATTGTTTcaatcatatactttattgtcTCCTTTTCTAAACAAACTAACTTGGATGCACCATATCAGAAACAAAATGCTTCATAATAAACGAGTCATCCAATCACTATAAGAGCACGCCCATTTTTGTTGTAACACTTTTGAATTTTGCATCTCTTCAATTTACAAACTTTGCTTTCATAGAATTCATGTCAGTAGCTTTTCACATTAGAACAGGCTGAGAAATAACTAATCTCTTAATATGAATCCGCATGTACAATTAAATGCATGTCAGGGTATCTTACAAGGGGACAAAGAAATTGCAATCAAGAGATTGTCTAAAGATTCCAACCAAGGAATTGATGAATTTAAAACTGAGGTTTCATTAATAGCAAAGCTTCAACATAGAAATCTTGTCCGACTGTTGGGTTGTTGCACACAAGGGGAGGAAAGAATGCtagtatatgaatatatgcacaACAAAAGCTTGGATGCTTTTCTATTTGGTAGTTTACATATATTCcattaattaaagaaaaatactTACCATAACAGAGTACTTATTTTAATTGTTGTGTATCATAATTCCAATGACAGATAAAGCAGGTGGTAAACGTTTGGATTGGCCAACACGCTACCATATTATTACAGGAATTGCACGAGGGCTTCTGTACCTTCATCAAGACTCTAGGTTTAGAATAATCCATAGAGATTTAAAAACTAGCAATGTTCTTCTTGACAAAGATATGAAtcccaaaatttcagattttggccTAGCAAGGATTCTTGGTGGGGATGAAGCAACCACAAGAACAAAACGGGTGGTTGGCACATAGTAAGAATAAATTCCTTTTAATAGCATTTTTTATACAAATTTTCACTTGAATGTTCATTTTCATTTATCTTAAAATACCCAGTGGTTATATGTCTCCTGAGTATGCAATGGATGGTGTTTTCTCAATCAAATCCGATGTGTTCAGTTTCGGAGTTATATTACTTGAAATTGTAAGCGGACAGAGAAGCAAAGGCGTGTTCCTCACTGAGCCACAGTCTAACCTCCTAATTAAAGTAAGTTTAAGAATATCCACACAAAGCACATTTAGCAGCTGTTTATAAGTAGTCAACTACTCATAACTTGTTCTTATTGTATGATAACAacttggaaaaagaagaaataagttGTTTGACATTTTCAAATGCAAGTTGTTTGAGTTGGAATTAAATGCAAGTTGAATTGTGGTGAGAGAGATGCATTGTGAAACAAGATTGAAATTTTAAGATTTTCGATAATAATTTCAGGCATGGCGTTTATTGACAGAAGATAGAGGAAAAGAATTAATCGACCCATCCATGGATCACGAGTTCTCTTTGGATGAAATTATAAGATGTATAAAAGTAGGCGTGCTATGCGTACAGCAAAAACCTGAAGCTAGACCAACAATGTCGTCGGTGGTGGTCATGTTGAGTGATCATCAAGATGCATCGGTTTGTAAGCCACAAGAGCCAGGGTTTACAGCAAGAAGAGATGTGTCTTCTCCTAATTCTTCTTCAAGTAACCATGATGTATTTACTAGCAACAGCATTTCCTTTCAATGGAAGTGGGTAGATGACCAATGTTCATTGAAATATTTCAGAATTGCAAATTGGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256468.1	2.3e-257	receptor-like serine/threonine-protein kinase SD1-8
Swissprot	O81905.1	1.0e-172	S-domain-1 (SD1) receptor kinase 8
trEMBL	A0A5P1FCT7	9.5e-253	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G21380.1	45.77	3e-176	615	ARK3;RK3	receptor kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G04276	AT4G21380.1	662	333	7	1	645	167	819	45.77	3e-176	615
Asa2G04276	AT1G11340.1	664	353	10	1	653	223	880	44.28	4e-167	585
Asa2G04276	AT1G65800.1	663	331	9	1	645	165	817	45.85	9e-167	584

Ortholog group

Species	Genes
Allium cepa	g140573.t1; g140630.t1; g183911.t1; g183912.t1; g184314.t1; g47269.t1; g491707.t1; g491709.t1
Allium fistulosum	AfisC3G04819; AfisC3G04821; AfisC3G04823; AfisC3G04827; AfisC3G04832; AfisC3G07037
Allium sativum	Asa0G02522.1; Asa2G03974.1; Asa2G04276.1; Asa2G07482.1
Arabidopsis thaliana	AT3G12000.1
Oryza sativa	LOC_Os04g54130.1; LOC_Os04g54140.1; LOC_Os04g54180.1; LOC_Os07g36544.1; LOC_Os12g15550.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00954.17	S_locus_glycop	Domain	51	159	105.5	1.9e-30
PF08276.8	PAN_2	Domain	181	249	66.0	2.1e-18
PF07714.14	Pkinase_Tyr	Domain	357	624	173.3	5e-51

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation
GO:0048544	P	recognition of pollen

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network