result

Gene information

Detail information of Asa2G04949

Location

Gene	Chr	Start	End	Strand
Asa2G04949	chr2	1348726401	1348731892	-

Sequences

CDS

>Asa2G04949.1
ATGGAAAGCAACCCATCAATTCAATCAAACAAAACAATGGAGTACGAAAACAACGAAGAAGAAGCAGAGAAGGAAATGGCTAAGGCAGAAGAATGCTATAAATCGAACAATATCCTAGGCGCAAACAAGCATATAACAAAAGCACATTCATTAAACCCGTCTCATCCACAAATAGCTAAGGTCATGGCAGCCATTCGGGTTCATGTTGTTGCATTGGACAAGCCATTCAGACCAACTAAAGATTACTGGTGCAGGATACTTGACTGTAACTCTACTGATGATCATCAGACTATGAAACTGCAGTACAAGAAAATGTGCTTGCTTACTCATCCTGATAAAAATCCCTCTGTATGTGCCGATGAAGCATTTAAAATCGTATCTGATGCTTGGGAGGCTTTGTCCGCGTCGCAGCCTCGGAATCAATCTAAGGATTCTGCTGAATCTGATAATTTCAGAAGTACCAATGGTGCTTCAAAACAACACAACCAAAGTACAAGTTCAGGCAACAACGATAGCGGCGGTCAATATAGTAAGAAAAATTCATACAGTGACTTTGAGTCCAATGATTCGTCAACTAATTCGGATGCAAATTCAAAGAATTCATCTGAAGACACAGGTCAAAATTTCGATAATCGCAGTCGTAACTGTGCAGGAGAACATGATACTCATTCTTCAAAATATGATTACCAAGATCATTCCTCAAATAATTTTTCATCCACAAAGGGGGCTAGTTTTTTCAATGATAGTAATGACAATGAGGAAGAATGCATGTTTGGTTCCAAGTTCAAAGGAAAGATTGACACAGAAAGCATGCAAGTAACAACCTTGGTGCAAATGGTGTTATCATGGTCACTAAAGGATGTGTTCAACAGAAATTTATTTAAAGACGAGGTCAAAACAATACCAAAGACTTTTACCTCTTTGGAACATTATTTAAACTCATTTACCAATCCGCTAATCGAAGAAACACATGCTGACCTGTGTTCGAATCTAGAGACAATATCACAAGCTCCTTATGTTGAAGTTGAGTACATTGAGGAGCTATCAGCAGCACAGTTGCAATACTACATTAAAGTTAAAAACCAGGACAAACATTTAGATGGCAAGGAAACGTACACACTGATCGAAGCTGATATGCTTGTTTTATCTGAATGCAAAATCAAACACATATCCGACCTCATGAAAAATGAAAGATCTTATGTAATTGCATACGTCCTGAAAGCTGGAAGTGAGACTGATGTTTTATCACCAAACGAACACATTATCAAAACAACTGAAAGATTTCCAATAGAGAGATATTTCAAAAAGCTTGGAAAAGGACCACAACAAATAAAACCTCTTTATGCAGCTCACATTCTAACCATGATTACATTCAATCGCATATGGAAATCGCTTGATCAGCGTATATCTGTTCAAAGAAGTAATGACCTTCTTAAGAAGGTTTGGAATTTTGATGTTCTGCAGGCAACAGAAGAAAGTACTTCAATCTCATCATACTATGTCGATGACCTTGAAAATTTCAAGCTTAACAAATCTCAGTTTGATGCTGTGAAAGACTGCCTATCGACAATCTATGATCAAAATCTCAATAGTACAATCAAGCTCATATGGGGACCTCCAGGTACTGGTAAAACTAAAACAATCAGTACTTTTCTGTACATTTTGCTTCAAAAGAACCGTAAAACTCTTGCATGTGCACCAACAAACACGGCTATAAAAGAAGTTACCACTCGACTACTGAAATTAGTGAAAGAATCATTGAGCCAAGAGCATTTCAGGTTTGGAGATTTTGCTTTGTTTGGAAATAAAAAGCGAATGAAAATAGATAATGACCTTAGCAAAGTGTTCATTGAAGACCGGGTTGAAAGGTTACGAACAGTTTTTGTGCCTCTAACTGGTTGGCGGCATCAACTTAGCTCTATGCTAGATCTGTTCGAAAATGTAACCTCACAATATGAGTTGTATTTAAGAATTGCGAAGGAAGACGAAGAGGGATCAGTAAAATTGCAGGAGTTAACACTGAAGGAATATATTGTAAAAAAATTCTTTTCACAGGCTAAAAAGTTGTGTGATTGTTTGACAATTATGGCTACAGATCTACCAAGAATCTCCATCTCTGGAAAAAACTTTGAAAACATGAGTATGCTCATGGAGTTGGTTGATTCTTTTGGAAAACATTTGAAGTCCGTGAAGGTTACTAGCAACATGCTAGCAGAAGTATTTGAAGAATCTATACTTGGAATGTTGAAGGATCAGTTATTTAGGACAAATGATTATATTGATATAAAAAACAAGCTAAGAAGCATGCGTTCTAATATAGTGAAAATACTACGTGTCCTGTCCAGAACTATTTCCCTTCCAGATCTATGTAACCGAAGCTCAATACAAGAATTCTGTTTACAAAACGCAGTTGTAATAATCTGCACAACTAGTACATCCTTTAAATTACATAACGTGCTAATGGAAAAGCAGATAGAAAATTTGGTAGTCGATGAGGCAGCGCAGTTGAAGGAATGTGAGACTTTGATTCCGTTGCAGCTGCCTGGAATTCGTCATGCTATTTTTATAGGTGATGAACACCAACTACCAGCTTTGGTTAAAAGCAAGATAAGCGAAAATGCTGGCTTCGGCAGAAGTCTTTTTGAAAGACTGAGCTTTTTAGGACACAAGAAACACTTGCTTGATGTTCAATATAGGATGCATCCTTCCATAAGTAAATTTCCAAATGCTAATTTCTATGATAAAAGAATATCTGATGGTCCAAATGTGTTACACCCTAGCTATGAGAAACAATACGTAGCTGGAAAAATGTATGGCCCTTACTCATTTATAAGCATTGAAGCTGGAGAAGAAACATCTGGTAAGAATGGGAGAGGGTGGAAGAACATGATAGAAGCTGAAGTTGTTGTGGCAATTATCAAAAGCCTTTATAGAGCATTCAGTATCAAAAAGGAAGAGATTGGAGTTGGAGTTATTTCACCATATACAGCTCAAGTTTCAGCTATACAAGAAAAAGTAAAGAAAATATATTCGACTACCGATAATGTTTCGGTTAAAGTTCAATCCATCGATGGATTTCAAGGAGGGGAAGAGGATATAATAATTATATCAACAGTAAGATCCAATAAAGCAGGGAATGTTGGTTTTCTGGATAAGCTTCAAAGAACAAATGTGTCTCTAACCAGAGCAAAACATTGCTTGTGGATAGTAGGAAGTGGATCAACCTTGTTAAAAAGCAACTCAATATGGGAAAAAATAGTAAGAGATGCAATGAATAGAGGTTGCTTCTTTGATGCAAAAGATGACCATGGCCTTGATGCTGCTATCGTCAAGGCGGCCGTCGAAAATGATGAACTTGATAATATACTAAAATTTGACACACTCCGTATTCAAAAGAAAAATTGGAAGGACACTAGAGGTCCCTCTTCAAAGGTGTGTAACATGTATAATACACGTGAAGGATGCAAGTTTGGAGACAGATGCAATTTTTCACATGGTGAAACAAGCCGGAACATAGTAGATAGAACTGCAACAAATGATTGTAGCTTGGATATGAAACCAATCACGTCTAGTTCTAAAGTAAAGACAAAGATCTGCAGGGACTTTGCCAAAGGTTCCTGCAAGTATGGTGCTAGATGCAGTTTTGCTCATGGTTCACTTGAATTGCAGAAACCATGGTGA

Protein

>Asa2G04949.1
MESNPSIQSNKTMEYENNEEEAEKEMAKAEECYKSNNILGANKHITKAHSLNPSHPQIAKVMAAIRVHVVALDKPFRPTKDYWCRILDCNSTDDHQTMKLQYKKMCLLTHPDKNPSVCADEAFKIVSDAWEALSASQPRNQSKDSAESDNFRSTNGASKQHNQSTSSGNNDSGGQYSKKNSYSDFESNDSSTNSDANSKNSSEDTGQNFDNRSRNCAGEHDTHSSKYDYQDHSSNNFSSTKGASFFNDSNDNEEECMFGSKFKGKIDTESMQVTTLVQMVLSWSLKDVFNRNLFKDEVKTIPKTFTSLEHYLNSFTNPLIEETHADLCSNLETISQAPYVEVEYIEELSAAQLQYYIKVKNQDKHLDGKETYTLIEADMLVLSECKIKHISDLMKNERSYVIAYVLKAGSETDVLSPNEHIIKTTERFPIERYFKKLGKGPQQIKPLYAAHILTMITFNRIWKSLDQRISVQRSNDLLKKVWNFDVLQATEESTSISSYYVDDLENFKLNKSQFDAVKDCLSTIYDQNLNSTIKLIWGPPGTGKTKTISTFLYILLQKNRKTLACAPTNTAIKEVTTRLLKLVKESLSQEHFRFGDFALFGNKKRMKIDNDLSKVFIEDRVERLRTVFVPLTGWRHQLSSMLDLFENVTSQYELYLRIAKEDEEGSVKLQELTLKEYIVKKFFSQAKKLCDCLTIMATDLPRISISGKNFENMSMLMELVDSFGKHLKSVKVTSNMLAEVFEESILGMLKDQLFRTNDYIDIKNKLRSMRSNIVKILRVLSRTISLPDLCNRSSIQEFCLQNAVVIICTTSTSFKLHNVLMEKQIENLVVDEAAQLKECETLIPLQLPGIRHAIFIGDEHQLPALVKSKISENAGFGRSLFERLSFLGHKKHLLDVQYRMHPSISKFPNANFYDKRISDGPNVLHPSYEKQYVAGKMYGPYSFISIEAGEETSGKNGRGWKNMIEAEVVVAIIKSLYRAFSIKKEEIGVGVISPYTAQVSAIQEKVKKIYSTTDNVSVKVQSIDGFQGGEEDIIIISTVRSNKAGNVGFLDKLQRTNVSLTRAKHCLWIVGSGSTLLKSNSIWEKIVRDAMNRGCFFDAKDDHGLDAAIVKAAVENDELDNILKFDTLRIQKKNWKDTRGPSSKVCNMYNTREGCKFGDRCNFSHGETSRNIVDRTATNDCSLDMKPITSSSKVKTKICRDFAKGSCKYGARCSFAHGSLELQKPW*

Gene

>Asa2G04949.1
ATGGAAAGCAACCcatcaattcaatcaaacaaaacaatGGAGTACGAAAACAACGAAGAAGAAGCAGAGAAGGAAATGGCTAAGGCAGAAGAATGCTATAAATCGAACAATATCCTAGGCGCAAACAAGCATATAACAAAAGCACATTCATTAAACCCGTCTCATCCACAAATAGCTAAGGTCATGGCAGCCATTCGGGTTCATGTTGTTGCATTGGACAAGCCATTCAGACCAACTAAAGATTACTGGTGCAGGATACTTGACTGTAACTCTACTGATGATCATCAGACTATGAAACTGCAGTACAAGAAAATGTGCTTGCTTACTCATCCTGATAAAAATCCCTCTGTATGTGCCGATGAAGCATTTAAAATCGTATCTGATGCTTGGGAGGCTTTGTCCGCGTCGCAGCCTCGGAATCAATCTAAGGTAACTCTTTCGATTGCTCTTCATACTCAACACACCATGTATTTATATGGAGTGTCCTTCAAGGATAGTTGCATGAATTGATTCTGATGGCAACTTGTTAAAAACCGTATGAATTACCTTGTTTTAACTTTTGTTAAAGAATTTAATGAATTAGAGCTAACATAAAAACTGGTTTTCCATTGTTCAATAGGGCTAAATACATAGCATGAATCACTTTGCAGTTATTTTTATGCATTTATATCATTCATATAATGGCAGATATGGCCAATTGGCCATTATGGTCTTAAACTGGAATTCAGTTTGGAAATTAgagttcaattttgattattttctccATATAATACTAAGACTAAGTGTGTTTGCTCATCTATATATTCCGCAGTtgaatttcaacaaatttaaatacCTTATGAATAATTTTTACCATGTTTGTCAGCACATTTTCATCAGCTAAGATATATGTAGaaactagaaaatatacgtttaacCAATGCGCATGCTCTACGTCACATAATTTCTTTGTATGAAAAGTTTTAGCCTCAAGTAAAGAGATGTTTTGCCGATATGCAAAAGATGCCTATTTGTATATTAAGAGCGTTCCGCttataagtaaaaaaataataatttacaagtAACCCTAGCAAAAAAGGAAAAAAGTCatttccaaacaacttgtttttttgatttatatgtcaaaatttcaACTGGCTTCACAAGCAATTGAGTTGCTTATGACTTATTATTTACTTTTGAGGGAAGTAATTTGTAAGTAATTTTGCAACAAGTAACTGCCAAAAAAAcccaaattaattccaaaaatgctACTATAACAAAAACAGTTTTTGTCAAAAAACACACcagagacaagaaaataggaggctcacccctgaattacacaaatacccctctgaaTTCAATGCATACAACCACTGAATTTTGGATTTACccttatttcttactttttgacaaaaactttttcgggtattgtagcataaCTCAATTAATTCTAATGTCTGTTATCTCTAACATGCTGCTGTGATAATGTATCAGTTTGTACATATAACCTTAAGgttgcaaataataataataatacaataacaataacaataacaataacaataataataataataataataataataataataataataataataataatttattttaacatactTCTGCTCAAAACGTTTTCTTCTGGTTTAGCATTTTTACGAAATTGATGATAGTGTTTTTATTTCCACAATCACAGGATTCTGCTGAATCTGATAATTTCAGAAGTACCAATGGTGCTTCAAAACAACACAACCAAAGTACAAGTTCAGGCAACAACGATAGCGGCGGTCAATATAGTAAGAAAAATTCATACAGTGACTTTGAGTCCAATGATTCGTCAACTAATTCGGATGCAAATTCAAAGAATTCATCTGAAGACACAGGTCAAAATTTCGATAATCGCAGTCGTAACTGTGCAGGAGAACATGATACTCATTCTTCAAAATATGATTACCAAGATCATTCCTCAAATAATTTTTCATCCACAAAGGGGGCTAGTTTTTTCAATGATAGTAATGACAATGAGGAAGAATGCATGTTTGGTTCCAAGTTCAAAGGAAAGATTGACACAGAAAGCATGCAAGTAACAACCTTGGTGCAAATGGTGTTATCATGGTCACTAAAGGATGTGTTCAACAGAAATTTATTTAAAGACGAggttaatattttatataaattttgttgattTCTCCTTTAGGTTCCTTCTATTACTTGTATATGAAATCGATGGACATTGTGTTTGAAATTGACTTTTTTACAGGTCAAAACAATACCAAAGACTTTTACCTCTTTGGAACATTATTTAAACTCATTTACCAATCCGCTAATCGAAGAAACACATGCTGACCTGTGTTCGAATCTAGAGACAATATCACAAGCTCCTTATGTTGAAGTTGAGTACATTGAGGAGCTATCAGCAGCACAGTTGCAATACTACATTAAAGTTAAAAACCAGGACAAACATTTAGATGGCAAGGAAACGTACACACTGATCGAAGCTGATATGCTTGTTTTATCTGAATGCAAAATCAAACACATATCCGACCTCATGAAAAATGAAAGATCTTATGTAATTGCATACGTCCTGAAAGCTGGAAGTGAGACTGATGTTTTATCACCAAACGAACACATTATCAAAACAACTGAAAGATTTCCAATAGAGAGATATTTCAAAAAGCTTGGAAAAGGACCACAACAAATAAAACCTCTTTATGCAGCTCACATTCTAACCATGATTACATTCAATCGCATATGGAAATCGCTTGATCAGCGTATATCTGTTCAAAGAAGTAATGACCTTCTTAAGAAGGTTTGGAATTTTGATGTTCTGGTGCGTTTTAAATGGGAAAATTTTGAtacttttttattttgttatatcatGAAGCCTTTGATTTATCAGTGCATTTATTTAATTTAGCAGGCAACAGAAGAAAGTACTTCAATCTCATCATACTATGTCGATGACCTTGAAAATTTCAAGCTTAACAAATCTCAGTTTGATGCTGTGAAAGACTGCCTATCGACAATCTATGATCAAAATCTCAATAGTACAATCAAGCTCATATGGGGACCTCCAGGTACTGGTAAAACTAAAACAATCAGTACTTTTCTGTACATTTTGCTTCAAAAGAACCGTAAAACTCTTGCATGTGCACCAACAAACACGGCTATAAAAGAAGTTACCACTCGACTACTGAAATTAGTGAAAGAATCATTGAGCCAAGAGCATTTCAGGTTTGGAGATTTTGCTTTGTTTGGAAATAAAAAGCGAATGAAAATAGATAATGACCTTAGCAAAGTGTTCATTGAAGACCGGGTTGAAAGGTTACGAACAGTTTTTGTGCCTCTAACTGGTTGGCGGCATCAACTTAGCTCTATGCTAGATCTGTTCGAAAATGTAACCTCACAATATGAGTTGTATTTAAGAATTGCGAAGGAAGACGAAGAGGGATCAGTAAAATTGCAGGAGTTAACACTGAAGGAATatattgtaaaaaaattcttttcacaGGCTAAAAAGTTGTGTGATTGTTTGACAATTATGGCTACAGATCTACCAAGAATCTCCATCTCTGGAAAAAACTTTGAAAACATGAGTATGCTCATGGAGTTGGTTGATTCTTTTGGAAAACATTTGAAGTCCGTGAAGGTTACTAGCAACATGCTAGCAGAAGTATTTGAAGAATCTATACTTGGAATGTTGAAGGATCAGTTATTTAGGACAAATGATTATATTGATATAAAAAACAAGCTAAGAAGCATGCGTTCTAATATAGTGAAAATACTACGTGTCCTGTCCAGAACTATTTCCCTTCCAGATCTATGTAACCGAAGCTCAATACAAGAATTCTGTTTACAAAACGCAGTTGTAATAATCTGCACAACTAGTACATCCTTTAAATTACATAACGTGCTAATGGAAAAGCAGATAGAAAATTTGGTAGTCGATGAGGCAGCGCAGTTGAAGGAATGTGAGACTTTGATTCCGTTGCAGCTGCCTGGAATTCGTCATGCTATTTTTATAGGTGATGAACACCAACTACCAGCTTTGGTTAAAAGCAAGGTACATCAACCATATTACTCTTTTATACAGTTCTTAGTTCTCACTATGAACTAACTCCCAGCGTGTTTTTTGCTATCTACCAGATAAGCGAAAATGCTGGCTTCGGCAGAAGTCTTTTTGAAAGACTGAGCTTTTTAGGACACAAGAAACACTTGCTTGATGTTCAATATAGGATGCATCCTTCCATAAGTAAATTTCCAAATGCTAATTTCTATGATAAAAGAATATCTGATGGTCCAAATGTGTTACACCCTAGCTATGAGAAACAATACGTAGCTGGAAAAATGTATGGCCCTTACTCATTTATAAGCATTGAAGCTGGAGAAGAAACATCTGGTAAGAATGGGAGAGGGTGGAAGAACATGATAGAAGCTGAAGTTGTTGTGGCAATTATCAAAAGCCTTTATAGAGGTAATATAGTATAATATTGGAATTATTCTTATgctgatatttataatatttacacCCTGTAAGTTAACGGACATCATAAACTCATGTTACTTGTCATTTTCTTTGGCATGGTATTACAGCATTCAGTATCAAAAAGGAAGAGATTGGAGTTGGAGTTATTTCACCATATACAGCTCAAGTTTCAGCTATacaagaaaaagtaaagaaaatatattcgACTACCGATAATGTTTCGGTTAAAGTTCAATCCATCGATGGATTTCAAGGAGGGGAAGAGGATATAATAATTATATCAACAGTAAGATCCAATAAAGCAGGGAATGTTGGTTTTCTGGATAAGCTTCAAAGAACAAATGTGTCTCTAACCAGAGCAAAGTGAGAAGcctatatagtatatacacacaGTAAGTTTTTATACAACCATGGCTTGAATTACAATATAATTGACAATTTTATGCAGACATTGCTTGTGGATAGTAGGAAGTGGATCAACCTTGTTAAAAAGCAACTCAATATGGGAAAAAATAGTAAGAGATGCAATGAATAGAGGTTGCTTCTTTGATGCAAAAGATGACCATGGCCTTGATGCTGCTATCGTCAAGGCGGCCGTCGAAAATGATGAACTTGATAATATACTAAAATTTGACACACTCCGTATTCAAAAGAAAAATTGGAAGGTATTCTATCAATCTCAGACTTCCTGAATGCACCACAAAATTAGAACTAACATAATAATTCATTCAAACTTATTTAGGACACTAGAGGTCCCTCTTCAAAGGTGTGTAACATGTATAATACACGTGAAGGATGCAAGTTTGGAGACAGATGCAATTTTTCACATGGTGAAACAAGCCGGAACATAGTAGATAGAACTGCAACAAATGATTGTAGCTTGGATATGAAACCAATCACGTCTAGTTCTAAAGTAAAGACAAAGATCTGCAGGGACTTTGCCAAAGGTTCCTGCAAGTATGGTGCTAGATGCAGTTTTGCTCATGGTTCACTTGAATTGCAGAAACCATGGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020249491.1	6.0e-256	helicase SEN1-like
Swissprot	Q00416.2	2.6e-46	tRNA-splicing endonuclease positive effector
trEMBL	A0A6P5ER60	6.5e-236	uncharacterized protein LOC109707103 isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G65810.1	40.20	8e-168	588		P-loop containing nucleoside triphosphate hydrolases superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G04949	AT1G65810.2	888	458	16	276	1136	22	863	40.20	6e-168	588
Asa2G04949	AT1G65810.1	888	458	16	276	1136	22	863	40.20	8e-168	588
Asa2G04949	AT5G37150.1	872	457	22	269	1116	2	819	38.65	4e-160	563

Ortholog group

Species	Genes
Allium cepa	g460765.t1; g505856.t1; g55783.t1
Allium fistulosum	AfisC3G03934; AfisC3G03940
Allium sativum	Asa2G04949.1; Asa7G07527.1
Arabidopsis thaliana
Oryza sativa	LOC_Os02g45900.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00226.28	DnaJ	Domain	86	141	38.8	7e-10
PF13086.3	AAA_11	Domain	508	869	144.8	3.4e-42
PF13087.3	AAA_12	Domain	877	1073	201.4	1e-59
PF00642.21	zf-CCCH	Family	1195	1218	35.4	6.2e-09

Gene Ontology

Accession	Ontology	Name
GO:0046872	F	metal ion binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K10706	SETX, ALS4; senataxin	EC:3.6.4.-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network