Detail information of Asa2G04975


Location
GeneChrStartEndStrand
Asa2G04975chr213590509201359051927-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020113277.11.7e-30HMG1/2-like protein isoform X1
SwissprotP26585.11.5e-26Protein SB11
trEMBLD6MKP44.8e-35Transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G20693.258.573e-34 140HMG BETA 1;HMGB2;NFD02;NFD2high mobility group B2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag292060.t1; g53385.t1
Allium fistulosumAfisC3G05992
Allium sativumAsa2G04975.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00505.16HMG_boxDomain4311285.12.9e-24

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11296HMGB3; high mobility group protein B3EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.