Detail information of Asa2G04979


Location
GeneChrStartEndStrand
Asa2G04979chr213609863101360995518+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK55993.15.4e-73uncharacterized protein A4U43_C10F3040
SwissprotQ9FV71.18.7e-52E2F transcription factor-1
trEMBLA0A5P1E2083.9e-73E2F_TDP domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G22220.242.306e-59 224ATE2FB;E2F1;E2FBE2F transcription factor 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag394813.t1
Allium fistulosumAfisC3G06000
Allium sativumAsa2G04979.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02319.17E2F_TDPDomain13219577.17.2e-22
PF16421.2E2F_CC-MBDomain21130983.88.1e-24

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005667Ctranscription factor complex
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K06620E2F3; transcription factor E2F3EC:- Cell cycleko04110
Cellular senescenceko04218

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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