Detail information of Asa2G05240


Location
GeneChrStartEndStrand
Asa2G05240chr214310539051431057679-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010904556.17.7e-95protein indeterminate-domain 5, chloroplastic
SwissprotQ8GYC1.11.9e-66Protein indeterminate-domain 4, chloroplastic
trEMBLA0A6I9Q7Z25.6e-95protein indeterminate-domain 5, chloroplastic

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G02080.150.788e-94 341AtIDD4;IDD4indeterminate(ID)-domain 4

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag524002.t1
Allium fistulosumAfisC3G06655
Allium sativumAsa2G05240.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12171.5zf-C2H2_jazFamily295124.52.2e-05

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12309GLB1, ELNR1; beta-galactosidaseEC:3.2.1.23 Galactose metabolismko00052
Sphingolipid metabolismko00600
Glycosaminoglycan degradationko00531
Glycosphingolipid biosynthesis - ganglio seriesko00604
Other glycan degradationko00511
Lysosomeko04142

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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