Detail information of Asa2G05391


Location
GeneChrStartEndStrand
Asa2G05391chr214774373511477441529-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK76042.15.2e-96uncharacterized protein A4U43_C03F23250
SwissprotQ6AWY3.21.2e-60Transcription activator GRF6
trEMBLA0A5P1FD593.8e-96Growth-regulating factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G22840.139.292e-56 217AtGRF1;GRF1growth-regulating factor 1

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Ortholog group
SpeciesGenes
Allium cepag216022.t1
Allium fistulosumAfisC3G06456
Allium sativumAsa0G00129.1; Asa2G05391.1; Asa3G04291.1; Asa3G04294.1
Arabidopsis thalianaAT2G22840.1; AT4G37740.1
Oryza sativaLOC_Os03g51970.1; LOC_Os12g29980.1; LOC_Os12g29980.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08880.8QLQDomain11815048.93.5e-13
PF08879.7WRCDomain18823071.92.4e-20

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005524FATP binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0016818Fhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15601KDM3; [histone H3]-dimethyl-L-lysine9 demethylaseEC:1.14.11.65 Thermogenesisko04714

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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