Detail information of Asa2G05932


Location
GeneChrStartEndStrand
Asa2G05932chr216284155501628425326+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020245148.19.2e-69transcription factor E2FB-like isoform X1
SwissprotQ9FV71.12.2e-43E2F transcription factor-1
trEMBLA0A5P1FTW96.6e-69E2F_TDP domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G22220.252.944e-47 184ATE2FB;E2F1;E2FBE2F transcription factor 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag298603.t1
Allium fistulosumAfisC3G06590
Allium sativumAsa2G05932.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02319.17E2F_TDPDomain11017282.91.1e-23
PF16421.2E2F_CC-MBDomain18924840.42.7e-10

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005667Ctranscription factor complex
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K06620E2F3; transcription factor E2F3EC:- Cell cycleko04110
Cellular senescenceko04218

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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