result

Gene information

Detail information of Asa2G06674

Location

Gene	Chr	Start	End	Strand
Asa2G06674	chr2	1806873826	1806875900	+

Sequences

CDS

Protein

Gene

>Asa2G06674.1
ATGAATATGAATCAGACTGCAAAAGCAGTAAATGGAAAGACTGCACGTGCCTGCAATGGATGCTTGAGGAGACGTGCGAGGTGGTACTGTGCAGCTGACGATGCCTTCCTGTGTCAGTCTTGCGATCTGTCTGTCCACTCTGCTAACCTGCTTGCAAGCAGGCATGAGAGAGTTAGGCTGAAGACAGCATCGTCTTGTGATGATAGTTTGCCAAGCTGGCATCAGGGGTTTAAGAGAAAAGCACGGACACCAAGACGCCATGCAAAAAGTTCTGCTGCAGTGAAGCCAGCAGTTCAAGTGCCGGAAATGGAAGCGTTCGCTGAAGAGGACAGTCCAGTGAGTGATATCGTGAATGAAGAAGGAGAGGAAAGGCTTTTGTACCAGGTGCCTGTGTTTGAACCTATATTTGATGACATGAAGTTGAACGATGTACGTAATAATGATATTGGAGGATACGATCCAACTGACATTGAACTAGCAGAGTTTGCTGCTGATGTGGAGATTATGCTAGGTCAAGGACTTGATGATATTGATGCTTTTGGGATCAATGCTTTAGGGTTACTGGAAGCAGAAGAAGATCAAAGTAAAGCGAAGGTTGAACTCATGGATGGAACTGTTGATTACTATGGTAAAGATGCAACAAATTTTGGGTTAGATATGGAAATGGAGTTTTCGAGGGGGTCACTCaatgttaattatgattgtgagGTTGAAGAGCAGAAGATGGAGGTAGAAGAGGAGAGAGGTACGTCAATGGGTATAGGTTTAAAGATCGACTACGAGTCGGTAATCAATGCATGGTCATGTCAAGGCACTTCACCATGGATTGATGGAGTTCAACCGCAGTTCAGTGCGCATGATTGCTGGTTAAACATAATGGTGAGAATATCTTAAttttatgttataacataaaaCAGTGATCCAAATCTCTATCTCTGAACATGCCACCGTAAAATTATGGGCTTCATAACAATTTACATACTGCATATAATTTATCAGTTGATAAAAACAATTTCTAGTCAGTACTCAGGATGCAGTTGAACATGTTTATTTTCCTCAACATGAGGGCACGGTTGAACAAGTTTCTCtttctcaaaataaaaaataataaaatggctCATAATGTCAAGGACCAATAGGACAATGGTAAGGCTCTAACTCGTGGATTTAGATATCCTagcattcaattttcaatttcaaaaggagGAAATAAATAGTAAGCAAGTTTCGTAATTTTTCCTTGAGCTATATGCACACCTCATGCCTAGgttttcaaaacttaaatcatATAGTTCAAGACTGAAATCAGCACAGGAATTAAATTATGATTAGTGAATCTAACTGAAtcatatttcaatgattatttatgtttatatgctAGAAGTGCTCACGTGTGTGTTATCAAATAACACTCAAATGTATATAAATGTTGATGATTCTTTTTCaagttataatattataatataaatagcttttaaattataaattatattttgaaattgattataatGCTTAAGCCATATGAACCTAAAACTCCATAGTCccttttgttttatcttttttttttttttccgatgagattttaaatgtagatttaaataaGTATAGAAGAGATTCAATCTTAAAAGGAATTCAAATCGTAATATCTTAAGATTTTTTATGACAATGTCATTATACAATCTCCAATCAGTTAAGGGGGTAGCgccataacatttttttttttaagttataatttttcaTTAGGGAGTGCTACATCACACTCACATAACATTTGTGTTTTTACACTCTGACACTGGAAACCTCTAGTTCAATTTTCTCATTGATGTTTATGGTAATATGATATACAGGGCATGTGGGGAACGCCAGTAGGAGGAGAAATGCAAGGAGCAAGTTATGTGTTTGGAAGTGGGCAAGTTGGTAATTTTGATGGAGGACGAGAGGCTAGAGTTTCAAGGTATCGAGAGAAGAGAAGGACAAGGCTATTTTCAAAGAGAATCAGGTACGAAGTGAGGAAACTTAATGCAGAAAAGAGGCCGAGGATGAAGGGGAGGTTTGTTAAAAGAACAGCAATGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	GFS32388.1	3.2e-72	B-box type zinc finger protein with CCT domain-containing protein
Swissprot	Q8RWD0.2	5.9e-63	Zinc finger protein CONSTANS-LIKE 16
trEMBL	A0A835H7V3	1.3e-75	Zinc finger protein CONSTANS-LIKE 16

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G25440.1	42.65	6e-71	264	BBX15	B-box type zinc finger protein with CCT domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G06674	AT1G25440.1	422	163	13	3	365	2	403	42.65	6e-71	264
Asa2G06674	AT1G68520.1	416	171	16	3	368	2	402	43.27	3e-67	252
Asa2G06674	AT1G73870.1	397	183	14	15	368	19	390	36.78	1e-54	210

Ortholog group

Species	Genes
Allium cepa	g106481.t1; g127554.t1; g335631.t1
Allium fistulosum	AfisC3G00856; AfisC3G05466; AfisC3G05750; AfisC6G02539; AfisC8G00883
Allium sativum	Asa2G00770.1; Asa2G06674.1
Arabidopsis thaliana	AT1G25440.1; AT1G68520.1
Oryza sativa	LOC_Os02g49880.1; LOC_Os03g50310.1; LOC_Os06g15330.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00643.21	zf-B_box	Domain	15	58	29.5	5.5e-07
PF06203.11	CCT	Motif	323	365	63.1	1.7e-17

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0005622	C	intracellular
GO:0008270	F	zinc ion binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K12135	CO; zinc finger protein CONSTANS	EC:-	Circadian rhythm - plant	ko04712

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network