Detail information of Asa2G06716


Location
GeneChrStartEndStrand
Asa2G06716chr218178254211817825606+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_006298630.11.0e-10multiprotein-bridging factor 1c
SwissprotQ9LV58.13.6e-13Multiprotein-bridging factor 1c
trEMBLR0I5C27.3e-11HTH cro/C1-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G24500.171.933e-1679.7ATMBF1C;MBF1Cmultiprotein bridging factor 1C

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag491996.t1
Allium fistulosumAfisC1G01470
Allium sativumAsa2G06716.1; Asa4G01103.1; Asa6G04159.1; Asa7G01409.1
Arabidopsis thalianaAT3G24500.1; AT3G24500.2
Oryza sativaLOC_Os06g39240.1; LOC_Os06g39240.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01381.19HTH_3Domain75432.75.3e-08

Gene Ontology
AccessionOntologyName
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K03627MBF1; putative transcription factorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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