Detail information of Asa2G06801


Location
GeneChrStartEndStrand
Asa2G06801chr218464917881846497998+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010919976.13.4e-262homeobox-leucine zipper protein ROC3
SwissprotQ336P2.17.4e-230Protein RICE OUTERMOST CELL-SPECIFIC 3
trEMBLA0A6I9R3P12.5e-262homeobox-leucine zipper protein ROC3

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G46880.152.800.0 750HB-7;HDG5homeobox-7

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag319674.t1; g342170.t1
Allium fistulosumAfisC3G08258; AfisC5G03651; AfisC6G01335; AfisC7G02371
Allium sativumAsa2G06801.1
Arabidopsis thalianaAT5G46880.1
Oryza sativaLOC_Os10g42490.1; LOC_Os10g42490.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00046.26HomeoboxDomain5511061.83.5e-17
PF01852.16STARTDomain250474117.06.8e-34

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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