result

Gene information

Detail information of Asa2G06893

Location

Gene	Chr	Start	End	Strand
Asa2G06893	chr2	1871638722	1871641301	-

Sequences

CDS

>Asa2G06893.1
ATGGATGGATTCAATGAAAAAGCTTTAGTTTTGAGGGAAACTAAGTGCTTCACTGGTACCAAATCTAGGTATCCTCTGCGTAATACCCCTGCTCGATCCGAATCTAAGCGCGTCTCTGGTTTTGATCAACGTCCAAATCGCGGCACTCCAGTATCTTGTAAGTCATTGAGCTCGCTAGCGACTAAGTCTCCTGAGCCTCCGTTTCCTCATCGCAATCGAATTTCAGCCATTCAAAACTCTGAAGAGAAGGAAGTGTCGTTAGAGAGTGTAGACAATGTGGAAATGGGGGTTAAAGAGGATGTTCAATATCTGGAAGGTCCAAAAATTGCATGTGAAACATTGCTCGAATACAGAAGAATACTTGATAAACTAAGGAAGTCTGGAAGTGGAAGTGGAAGTGGAAGTGAAAGAAGACAACGCAAGCCTAATATAATGGCCTATGAAGTACTAAAAGAGAAGACTAAAATTTCAGACTTTTCCAATAAAAGTATTGGTAGCGTACCTGGTATTGAAATTGGCGATGAATTTGAATGTAGATTTGAATTGGTCTTGGCTGGATTACATCCCAGTAGGGGAGGAACTGTAGGTCATATTTTTAAAGACAAGAAGTATATAGCAGTTAGCATAGTTTTTGACATTTCCTATGAGTTAAATAAAACTGCAGGCATATCTGATGATGTTTTGGTGTGTAGTAGTCAGAATGAAGGCAACAGTCGGAAGTCAGAACGTGCAAATTCAGCACTTAAATACAGTGCAGTTGAAAAAAACCCAGTTAGGGTTGTTCTTTGTTTTGGGAATGTTAAAAGATATATTTATGCTGGGTTGTATTTCATTCAAAACAGTTGGAGGGAAAAGGGGCATGATAAATCTGTCAATTATTTTGAGTTGAAGAGGCTTAAGAACCAAGCTGAATTGGACATTAAATCACTTGTGAAATCGACAAGCTTCAATGTAGGAAGGGAAAAAGTCATTGAAGATGAACACATGAGCCATGAGAATGGCAGAGTTAATTGTTTGGTTAAGAGAAAGAGAGAGGAGAAAAAGAAGAGAGATAAATCTTATGTCAAGGGAGATGAACATGCTGAAAATAGGAAAAGAATCAAACAGCTAACGTATGATTTTCTGTCAGCGTATGAAAAACTCTCGAAGGATAAGAGGGGCCGTGTTGGAAGATTTGATCTTGGTGCTTATGATGTTATGAAGTCGAAACACAGATATTTGGTAAATGTTGAAAAGTGCTTAGGATGCATCTCTGGTGTTGATGTAGGAGATATATTTCACTTTAAAGTTCAACTGTTGATGCTTGGCCTGCACTGTTGTCCCAGAGGAGACATTGATTATTTAACAAAAGATGACAGGTTGCTTGCCACAAGTATTGCTTCTGTCCACTTCGAGGAATTTGATGAAAATGCATTTAAAACCGATACTTTCTTGTTTCGTGGACATGGACTGAAGCACTCAGATCAGAAATTGGAATCTGGAAACTTAGCACTCAAGAATAATATTGATGCCAAGATACCTATTAGGATATTCCGTGGCCTGAGGAAAGGGCATATAGCAGCTTTATATGTTTATTGTGGACTGTATATGGTTGAGAAGTATTGGAAGAAGAAAAATATAGATGGTTATGATGTCTTCATGTACCGGTTGAATAGATTGCCGGGTCAACCTAAGGTTAGTTTTGAAGTGGCTAATGAATTCTTGGGCTCTCTAACACGACCTGGCCCCTGGTACAACGATGACATTTCTAGAGGAAAGGAGAAAATTCCCATAAGAGTAGTAAACGCCATCAACAATGAAAATTTACCACCTTTCAAGTACATGACTTCAGTTGTACAGTCGTCTAACTTCAACCCAGTTCCCAAAGAGGGCTGTGATTGTGTTGGTGGCTGCACAGATTCTGATAAATGTGCGTGCGCTGTTCGAAACGGGGGCGAGCTCCCTTTCAATAGCGAAGGCTTAATTGTCAAAGCCAAGCCCTTGATATATGAATGTGGCCCATCTTGCAAATGCCCTCCTTCTTGTTCTAATAAAGTCAGCCAAAATGGGATCAAATTTCCATTTGAGGTGTTCAAAACAGAGAAAATGGGTTGGGGAGTGCGATCTCGAGCTTTCATACCCATGGGAAGCTTCATATGTGAGTTTGTAGGAGAGCTTCTAAAGGACGAAGAAGCTCAAAAGAGGACCAACGATGACTATATGTTTGCAGTCGGTAATAATTACTATGATGAGGTGCTATGGGAAGGACTTTCTTCAGTTCCTTGCTTGCAAATAAGAGCTCCAAGCGATGATTCTGAATACGATGGAGGGTTCAGCATAGATGCTTCAGTATATGGAAATTTTGGAAGACTGATTAACCATAACTGCACTCCTAACCTTTATGCTCAAAATGTACTCTATGACCACGATGATATAAGAATGCCGCATATTGTATTCTTTGCATGCGAAGACATTCCACCAATGCAAGAGCTGAGTTATCATTACAACTATACCATTGACGGTGTTCATGATTCTAAGGGTAACATAAGGAAGAAGAACTGTTACTGTGGCTCCATTGAGTGTACCGGTAGACTCTACTGA

Protein

Gene

>Asa2G06893.1
ATGGATGGATTCAATGAAAAAGCTTTAGTTTTGAGGGAAACTAAGTGCTTCACTGGTACCAAATCTAGGTATCCTCTGCGTAATACCCCTGCTCGATCCGAATCTAAGCGCGTCTCTGGTTTTGATCAACGTCCAAATCGCGGCACTCCAGTATCTTGTAAGTCATTGAGCTCGCTAGCGACTAAGTCTCCTGAGCCTCCGTTTCCTCATCGCAATCGAATTTCAGCCATTCAAAACTCTGAAGAGAAGGAAGTGTCGTTAGAGAGTGTAGACAATGTGGAAATGGGGGTTAAAGAGGATGTTCAATATCTGGAAGGTCCAAAAATTGCATGTGAAACATTGCTCGAATACAGAAGAATACTTGATAAACTAAGGAAGTCtggaagtggaagtggaagtggaagtgaAAGAAGACAACGCAAGCCTAATATAATGGCCTATGAAGTACTAAAAGAGAAGACTAAAATTTCAGACTTTTCCAATAAAAGTATTGGTAGCGTACCTGGTATTGAAATTGGCGATGAATTTGAATGTAGATTTGAATTGGTCTTGGCTGGATTACATCCCAGTAGGGGAGGAACTGTAGGTCATATTTTTAAAGACAAGAAGTATATAGCAGTTAGCATAGTTTTTGACATTTCCTATGAGTTAAATAAAACTGCAGGCATATCTGATGATGTTTTGGTGTGTAGTAGTCAGAATGAAGGCAACAGTCGGAAGTCAGAACGTGCAAATTCAGCACTTAAATACAGTGCAGTTGAAAAAAACCCAGTTAGGGTTGTTCTTTGTTTTGGGAAtgttaaaagatatatttatgCTGGGTTGTATTTCATTCAAAACAGTTGGAGGGAAAAGGGGCATGATAAATCTGTCAATTATTTTGAGTTGAAGAGGCTTAAGAACCAAGCTGAATTGGACATTAAATCACTTGTGAAATCGACAAGCTTCAATGTAGGAAGGGAAAAAGTCATTGAAGATGAACACATGAGCCATGAGAATGGCAGAGTTAATTGTTTGGTTAAGAGAAAGAGAgaggagaaaaagaagagagataaATCTTATGTCAAGGGAGATGAACATGCTGAAAATAGGAAAAGAATCAAACAGCTAACGTATGATTTTCTGTCAGCGTATGAAAAACTCTCGAAGGATAAGAGGGGCCGTGTTGGAAGATTTGATCTTGGTGCTTATGATGTTATGAAGTCGAAACACAGATATTTGGTAAATGTTGAAAAGTGCTTAGGATGCATCTCTGGTGTTGATGTAGGAGATATATTTCACTTTAAAGTTCAACTGTTGATGCTTGGCCTGCACTGTTGTCCCAGAGGAGACATTGATTATTTAACAAAAGATGACAGGTTGCTTGCCACAAGTATTGCTTCTGTCCACTTCGAGGAATTTGATGAAAATGCATTTAAAACCGATACTTTCTTGTTTCGTGGACATGGACTGAAGCACTCAGATCAGAAATTGGAATCTGGAAACTTAGCACTCAAGAATAATATTGATGCCAAGATACCTATTAGGATATTCCGTGGCCTGAGGAAAGGGCATATAGCAGCTTTATATGTTTATTGTGGACTGTATATGGTTGAGAAGTAttggaagaagaaaaatatagatgGTTATGATGTCTTCATGTACCGGTTGAATAGATTGCCGGGTCAACCTAAGGTTAGTTTTGAAGTGGCTAATGAATTCTTGGGCTCTCTAACACGACCTGGCCCCTGGTACAACGATGACATTTCTAGAGGAAAGGAGAAAATTCCCATAAGAGTAGTAAACGCCATCAACAATGAAAATTTACCACCTTTCAAGTACATGACTTCAGTTGTACAGTCGTCTAACTTCAACCCAGTTCCCAAAGAGGGCTGTGATTGTGTTGGTGGCTGCACAGATTCTGATAAATGTGCGTGCGCTGTTCGAAACGGGGGCGAGCTCCCTTTCAATAGCGAAGGCTTAATTGTCAAAGCCAAGCCCTTGATATATGAATGTGGCCCATCTTGCAAATGCCCTCCTTCTTGTTCTAATAAAGTCAGCcaaaatgggatcaaatttccatttgaggTGTTCAAAACAGAGAAAATGGGTTGGGGAGTGCGATCTCGAGCTTTCATACCCATGGGAAGCTTCATATGTGAGTTTGTAGGAGAGCTTCTAAAGGACGAAGAAGCTCAAAAGAGGACCAACGATGACTATATGTTTGCAGTCGGTAATAATTACTATGATGAGGTGCTATGGGAAGGACTTTCTTCAGTTCCTTGCTTGCAAATAAGAGCTCCAAGCGATGATTCTGAATACGATGGAGGGTTCAGCATAGATGCTTCAGTATATGGAAATTTTGGAAGACTGATTAACCATAACTGCACTCCTAACCTTTATGCTCAAAATGTACTCTATGACCACGATGATATAAGAATGCCGCATATTGTATTCTTTGCATGCGAAGACATTCCACCAATGCAAGAGCTGAGTTATCATTACAACTATACCATTGACGGTGTTCATGATTCTAAGGGTAACATAAGGAAGAAGAACTGTTACTGTGGCTCCATTGAGTGTACCGGTAGACTCTACTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020240672.1	2.4e-219	uncharacterized protein LOC109819373
Swissprot	O82175.1	2.1e-119	Suppressor of variegation 3-9 homolog protein 5
trEMBL	A0A8T3BJM7	3.9e-155	Histone-lysine N-methyltransferase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G35160.1	43.27	2e-118	424	SGD9;SUVH5	SU(VAR)3-9 homolog 5

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G06893	AT2G35160.1	520	239	10	364	859	307	794	43.27	2e-118	424
Asa2G06893	AT2G35160.1	188	94	7	146	313	346	530	37.77	7e-18	89.7
Asa2G06893	AT2G22740.1	497	243	11	385	859	300	790	45.47	5e-118	422

Ortholog group

Species	Genes
Allium cepa	g233731.t1; g63389.t1
Allium fistulosum	AfisC1G08240; AfisC3G08379
Allium sativum	Asa0G05939.1; Asa1G00655.1; Asa1G01815.1; Asa1G03092.1; Asa2G06893.1; Asa4G03726.1; Asa4G03796.1; Asa6G00357.1; Asa6G03184.1
Arabidopsis thaliana
Oryza sativa	LOC_Os04g45990.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02182.14	SAD_SRA	Domain	164	302	77.4	8.6e-22
PF02182.14	SAD_SRA	Domain	415	556	109.5	1.1e-31
PF05033.13	Pre-SET	Family	582	678	65.9	3.6e-18
PF00856.25	SET	Family	697	829	76.5	2.8e-21

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0042393	F	histone binding
GO:0005634	C	nucleus
GO:0008270	F	zinc ion binding
GO:0018024	F	histone-lysine N-methyltransferase activity
GO:0034968	P	histone lysine methylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K11420	EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT	EC:2.1.1.355	Lysine degradation	ko00310
K11420	EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT	EC:2.1.1.355	Longevity regulating pathway	ko04211

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network