Detail information of Asa2G07204


Location
GeneChrStartEndStrand
Asa2G07204chr219618436491961853270+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrRWR94037.11.0e-87homeobox protein knotted-1-like protein 2 isoform X2
SwissprotQ84JS6.11.6e-74Protein KNAT6
trEMBLA0A3S3R1W37.3e-88Homeobox protein knotted-1-like protein 2 isoform X2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G23380.152.564e-80 294KNAT6;KNAT6L;KNAT6SKNOTTED1-like homeobox gene 6

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag45175.t1
Allium fistulosumAfisC3G08682
Allium sativumAsa2G07204.1; Asa2G07205.1
Arabidopsis thalianaAT1G23380.1; AT1G23380.2; AT1G70510.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03790.10KNOX1Family6610665.32.7e-18
PF03791.10KNOX2Family11616179.49.9e-23
PF03789.10ELKDomain20522640.41.9e-10
PF05920.8Homeobox_KNFamily24528464.07.5e-18

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K16670MEIS2; homeobox protein Meis2EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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