result

Gene information

Detail information of Asa2G07297

Location

Gene	Chr	Start	End	Strand
Asa2G07297	chr2	1985085294	1985086919	+

Sequences

CDS

>Asa2G07297.1
ATGCCTAACTGGAGCAAGGGTCCATTCCTCGGCCGTGGCTCAACCGCCATCGTCTCCCTCGCCTCTGATCTTAATTCTGGTGAACTCTTCGCCGTTAAATCAACAAGTCTCTCAAACTCCGAACTCCTTCAATATGAAAAGAGCATCCATTCTTCAATCTCTTCTCCTCACATAATCTCTTATTTAGGCTGCGATTCAGACGATGACTTCTACAATCTCTTTCTCGAGTACGCGCCTGGCGGGTCCATCTCGGACGCGATCAGAAAACAAAAGCTTCAGGAATCTGAAATCAGATCCTTTGTGAAAGACATTTCGCTTGGATTGAGCCATCTTCACTCTATTAAAATTGCCCACTGCGACATCAAATGTCAGAACGTACTCATCTGTGGCAACGGAAAAGCCAAAATTGCTGATTTAGGTTGCGCCAAGTTTATAGACTGTGATAATAAAATCAGGGCAAAATTAAGGGGAACGCCAATGTTCATGTCGCCGGAGGTTGCCAGAGGAGAAGAGCAAGGACTGGCATCAGATGTGTGGGCCCTCGGATGCACAGTTATAGAAATGGCAACTGGAAGAGCTCCATGGCCCGATATCTCAAATGCGGGTTCCCTTCTTCACCGGGTCGGTTTCACAGAGGATGTGCCTGAAATACCGGAATGGATTTCAGATTCTGGTAAGGATTTTCTGAGGAATTGTTTGGTGAAGGATGCTGGAGGGAGGTCCAGTGTTGACGGGTTGCTGGAGCATCCCTTCTTAACGAGCACGGACACAGGCACGGGCATGGAGGTGTACAAAGGTGTCACACCAAAGAGTATAATGGAAAATAGCATATGGGAATCGGTATCAGAAAACGAAGCAGTTGAAGATTTCAGATCCAACAGGATTTTGGATTTGATTGGGTTTGGCGATCGTCCTGAATGGAGCTGGGATGACAGATGGCATACACTACGCAATGAATCATTGTTTACTGGAGTTACCGTTGCGAGCGTTGCAGCTGCCATTAGTGAAGAACTATCATCAGAATATGGTTTTAATAGCGAATTATGCGGTTATATCGATGTCAACATGGATAGATGTGTTGAGACAAGTGTGTGCTTTTGTGAGAATTGTACAAACAATGATGATGATGATGATGATGATGATGATGAGTTGACTCTTGCACCTGACTTTTGA

Protein

Gene

>Asa2G07297.1
atgccTAACTGGAGCAAGGGTCCATTCCTCGGCCGTGGCTCAACCGCCATCGTCTCCCTCGCCTCTGATCTTAATTCTGGTGAACTCTTCGCCGTTAAATCAACAAGTCTCTCAAACTCCGAACTCCTTCAATATGAAAAGAGCATCCATTCTTCAATCTCTTCTCCTCACATAATCTCTTATTTAGGCTGCGATTCAGACGATGACTTCTACAATCTCTTTCTCGAGTACGCGCCTGGCGGGTCCATCTCGGACGCGATCAGAAAACAAAAGCTTCAGGAATCTGAAATCAGATCCTTTGTGAAAGACATTTCGCTTGGATTGAGCCATCTTCACTCTATTAAAATTGCCCACTGCGACATCAAATGTCAGAACGTACTCATCTGTGGCAACGGAAAAGCCAAAATTGCTGATTTAGGTTGCGCCAAGTTTATAGACTGTGATAATAAAATCAGGGCAAAATTAAGGGGAACGCCAATGTTCATGTCGCCGGAGGTTGCCAGAGGAGAAGAGCAAGGACTGGCATCAGATGTGTGGGCCCTCGGATGCACAGTTATAGAAATGGCAACTGGAAGAGCTCCATGGCCCGATATCTCAAATGCGGGTTCCCTTCTTCACCGGGTCGGTTTCACAGAGGATGTGCCTGAAATACCGGAATGGATTTCAGATTCTGGTAAGGATTTTCTGAGGAATTGTTTGGTGAAGGATGCTGGAGGGAGGTCCAGTGTTGACGGGTTGCTGGAGCATCCCTTCTTAACGAGCACGGACACAGGCACGGGCATGGAGGTGTACAAAGGTGTCACACCAAAGAGTATAATGGAAAATAGCATATGGGAATCGGTATCAGAAAACGAAGCAGTTGAAGATTTCAGATCCAACAGGATTTTGGATTTGATTGGGTTTGGCGATCGTCCTGAATGGAGCTGGGATGACAGATGGCATACACTACGCAATGAATCATTGTTTACTGGAGTTACCGTTGCGAGCGTTGCAGCTGCCATTAGTGAAGAACTATCATCAGAATATGGTTTTAATAGCGAATTATGCGGTTATATCGATGTCAACATGGATAGATGTGTTGAGACAAGTGTGTGCTTTTGTGAGAATTGTACaaacaatgatgatgatgatgatgatgatgatgatgaggtaGAGTTGATTTCAAGTGCTAATAATATATTATGTCTGATTGGAAATGATGAATTTTCTCTGTATATATTGGTAACTTgtagttttcaaatgttatgtgcTGTTTATGTTATGTGCTGGGTTGATATCTTTATTTTAAGGTTGGGGGTTACTGCGCGTTCATTCACATATTTCTGTGCCCCATACGTTGTCGAAAAAAACACACACGTACATAGATATAGGTATGTACCAACGTGTGGGTGCATGGTGGGTTGGAGGATGAAGATGATAAATGAAAGCATGTAACATGTAATACACGCCACAGACGAGAGTGAGAACATGTACGCAGTGCAGCTGCAACTAATTCACTAACGGCTGGGTTCGGTATTGCAATTATCTTTaataaatcagattttgacttACAGAATAGTATAGCAGTAGTCTAAGCCTAAGGACCACATGGCTTTGAATTAGTTGACTCTTGCACCTGACTTTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010926215.1	1.7e-84	mitogen-activated protein kinase kinase kinase 18
Swissprot	Q9ZVP5.1	1.7e-63	Mitogen-activated protein kinase kinase kinase 18
trEMBL	A0A8K0MWL9	3.9e-86	Mitogen-activated protein kinase kinase kinase 18

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G26890.1	48.25	6e-72	268	MAPKKK16	mitogen-activated protein kinase kinase kinase 16

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G07297	AT5G55090.1	285	136	6	3	279	5	285	48.07	6e-72	268
Asa2G07297	AT4G26890.1	286	134	5	3	280	4	283	48.25	6e-72	268
Asa2G07297	AT1G05100.1	307	146	8	3	292	2	301	44.63	1e-65	247

Ortholog group

Species	Genes
Allium cepa	g101987.t1; g123933.t1; g123940.t1; g123955.t1; g501304.t1
Allium fistulosum	AfisC3G08816; AfisC3G08820; AfisC3G08821; AfisC3G08824; AfisC3G08826; AfisC3G08827; AfisC6G00245
Allium sativum	Asa0G03825.1; Asa2G03244.1; Asa2G07284.1; Asa2G07285.1; Asa2G07286.1; Asa2G07291.1; Asa2G07296.1; Asa2G07297.1; Asa2G07299.1; Asa2G07316.1; Asa8G05772.1
Arabidopsis thaliana	AT1G05100.1; AT4G26890.1
Oryza sativa	LOC_Os01g50370.1; LOC_Os01g50400.1; LOC_Os01g50410.1; LOC_Os02g21700.1; LOC_Os05g46760.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	8	252	172.7	8.3e-51

Gene Ontology

Accession	Ontology	Name
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K11228	STE11; mitogen-activated protein kinase kinase kinase	EC:2.7.11.25	MAPK signaling pathway - yeast	ko04011

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network