result

Gene information

Detail information of Asa2G07376

Location

Gene	Chr	Start	End	Strand
Asa2G07376	chr2	2003520910	2003522679	-

Sequences

CDS

Protein

Gene

>Asa2G07376.1
ATGTACAACAGCAGTTGTAGTTATATGATGGCGGCACCAGCAtgccctccttcttcctccttgccTGTTAGGAGTAATAATAAGGAGACAAAGCAAAAAAGGAAAAGCGATGGCGTACGGAAAGGAGCATGGAGTAGAGAAGAAGATGAACTTTTAATGAAGTGCATTCAGAAATATGGTGAGGGAAAGTGGAGTTCTGTTCCATCTCGTGCTGGTACTTCATATTACTTGATCATTGATTCTTTATAATTACTTGGTAGGGTATACTTGTTAGAAATTCATTATTTCTATGCATGCATATATTGCACAAATCTAGGACTTAAAAGATGCAGAAAAAGCTGTAGGCTCCGGTGGTTGAACTATCTCTCACCCGCAATACACCGTGGAGAGTTCAAAGACGATGAAATCgaccttattttcagaattcacAAGCTCTTAGGCAACAGGTACATTACTTACATTTAAAGTATTCAGATACGAATGTGAATTTTAATCGgctccaaaaataattttttttttggaggaACTATGCATTCTTTATAGTACAAGGCTGTAGATGGGTGTcttctttttatctttttcttttttcatgtCATTTTGGGCATTCTTCAGTGAATAAACCAATCTTCCATGAAAGTTGTCCAATATGATTGCATAATAACAATGTTCAAAATAGAAGCACATAACAAGTTAAAGTATATTTTGAGCATGACCAAGTTAAATCTACTTATAAACTACTTATTTAAATTATAGTGTTTGATGACTCATCGTAGTAAGCACATAACAAGTTTAAGTATATTTAGTTAAAAATGACTTACTGACAAAGAAAATGTGAAGCATGTTGACAACATGAAAGACTCAGTAGCTGAGATACTTGTGAGCTAGTCATGCAGTAACATTATGTCAGATCAGTTCCATTCGATGAATCGGTGGTTGTTCACGCCACAATTATGGCCAATAAACATGCACAGTAAATAAAATTACTCATCTTTTTAATCTAGCGATGGCAACCGACACATGCCAAGAGAGTACGTACCCCCCGGAAGCAATGATAGTAACACACCTGGCATGCTAGCTCATTGGTAGCTGAGATGAACTCATATATATGGCagataattaacatgttatgttaaCTGTATTACAGATAAAATCCATGAAGTGATAATTAAGAGCTAGCGAATGCGGacctttgtttgtttatttggatatattttaccattcaaaaaaaaaaccacaacGAAGATATCAAAAACATGCATCGTCGCCATTATTTGTCAAGCCTAATAATTGTAAATTGAATGAAATACCAGGTGGTCTCTGATAGCTGGAAGAATCCCAGGGAGAACAGCCAACGACATAAAGAATTTCTGGAACACTCGCCTGGGCAGGCAGAAGTTAACAACACATGAGTtccccaaaaataataataaaattggcaCTAGCATTCATCACCATCTCGTACACTTGAAAGAAACAACCGAGGATGAAGGTGATACTTGTAGGAAGGGAAAAGCAAAAGCAATCTGTAAACCACAGCCTAAAAGATTCTCCTCCGCCGAGGCTTGGAAAAAAGCTGGAGTGGTGCAGCCAAAAGAGACAACCGTGACAATAAATCGGACAACTGAACATTTACTTAGGGATTTAATGAATGAAAACAGTGATAGTCTTGCATCATTGGACTACGAGTTCAGTATGATGGATCAGGCTCTGCTCTTTGATGCTTTCAAGGAATGGGAGGACTTACTCTGTACTACTAACAATCCATGCTAG

Functional annotation

Database	accession number	e-value	annotation
nr	AQP25671.1	1.2e-111	MYB transcription factor
Swissprot	A0A2R6S148.1	5.3e-45	Myb-related protein 1
trEMBL	A0A1S5VID8	8.3e-112	MYB transcription factor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G66370.1	70.48	2e-42	169	AtMYB113;MYB113	myb domain protein 113

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa2G07376	AT1G66370.1	105	31	38	142	7	111	70.48	2e-42	169
Asa2G07376	AT1G56650.1	107	31	36	142	5	111	71.03	2e-39	159
Asa2G07376	AT1G66380.1	107	29	36	142	5	111	72.90	4e-39	158

Ortholog group

Species	Genes
Allium cepa	g312529.t1
Allium fistulosum	AfisC3G03591; AfisC6G00239
Allium sativum	Asa2G07376.1; Asa2G07377.1; Asa4G04707.1
Arabidopsis thaliana	AT1G56650.1; AT1G66380.1; AT1G66390.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	41	88	60.7	1e-16
PF00249.28	Myb_DNA-binding	Domain	94	137	44.6	1.1e-11

Gene Ontology

Accession	Ontology	Name
GO:0003682	F	chromatin binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09422	MYBP; transcription factor MYB, plant	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network