Detail information of Asa3G00005


Location
GeneChrStartEndStrand
Asa3G00005chr313123281312627-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK82022.11.9e-27uncharacterized protein A4U43_C01F35330
SwissprotQ9XE33.19.2e-27Transcriptional activator HAP5D
trEMBLA0A8B7MUL11.4e-27nuclear transcription factor Y subunit C-6-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G48590.160.209e-30 124ATHAP5A;HAP5A;NF-YC1nuclear factor Y, subunit C1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00808.20CBFD_NFYB_HMFDomain15455.74.1e-15

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0016602CCCAAT-binding factor complex
GO:0043565Fsequence-specific DNA binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08066NFYC, HAP5; nuclear transcription factor Y, gammaEC:- Antigen processing and presentationko04612

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.