Detail information of Asa3G00140


Location
GeneChrStartEndStrand
Asa3G00140chr35324589653272459-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020274535.16.2e-247DDT domain-containing protein PTM-like
SwissprotF4JYC8.13.7e-95PHD type transcription factor with transmembrane domains
trEMBLA0A8B8J3T81.2e-215DDT domain-containing protein PTM

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G12400.141.084e-78 290DNA binding;zinc ion binding;DNA binding

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Ortholog group
SpeciesGenes
Allium cepag195629.t1
Allium fistulosumAfisC7G06244
Allium sativumAsa3G00140.1
Arabidopsis thalianaAT5G12400.1
Oryza sativaLOC_Os07g46690.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02791.14DDTFamily11416431.51.5e-07
PF15612.3WHIM1Family22025824.11.7e-05
PF00628.26PHDDomain30935233.42.7e-08

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0008270Fzinc ion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11728BPTF, E(bx); nucleosome-remodeling factor subunit BPTFEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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