Detail information of Asa3G00146


Location
GeneChrStartEndStrand
Asa3G00146chr35487127554911838+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK62721.12.2e-288uncharacterized protein A4U43_C07F7410
SwissprotC0LGD7.21.9e-220Probable LRR receptor-like serine/threonine-protein kinase At1g06840
trEMBLA0A5P1EDD31.6e-288Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G06840.163.410.01161Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag200000.t1; g390688.t1; g400702.t1; g538117.t1
Allium fistulosumAfisC2G06953; AfisC8G01863
Allium sativumAsa0G05573.1; Asa1G03306.1; Asa1G03309.1; Asa3G00146.1
Arabidopsis thalianaAT1G06840.1
Oryza sativaLOC_Os01g60280.1; LOC_Os01g72990.1; LOC_Os01g72990.2; LOC_Os05g40270.1; LOC_Os05g40270.10; LOC_Os05g40270.2; LOC_Os05g40270.3; LOC_Os05g40270.4; LOC_Os05g40270.5; LOC_Os05g40270.6; LOC_Os05g40270.7; LOC_Os05g40270.8; LOC_Os05g40270.9

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08263.9LRRNT_2Family10113926.26.7e-06
PF13855.3LRR_8Repeat22128131.88.1e-08
PF13855.3LRR_8Repeat36540228.21e-06
PF00069.22PkinaseDomain688952160.83.6e-47

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0004672Fprotein kinase activity
GO:0004713Fprotein tyrosine kinase activity
GO:0005524FATP binding
GO:0006468Pprotein phosphorylation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K04730IRAK1; interleukin-1 receptor-associated kinase 1EC:2.7.11.1 MAPK signaling pathwayko04010
NF-kappa B signaling pathwayko04064
Toll-like receptor signaling pathwayko04620
Toll and Imd signaling pathwayko04624
Neurotrophin signaling pathwayko04722

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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