result

Gene information

Detail information of Asa3G00162

Location

Gene	Chr	Start	End	Strand
Asa3G00162	chr3	58539106	58543622	-

Sequences

CDS

>Asa3G00162.1
ATGACAAAAACCTCTTCAAGAAACAATGGTTGTCTTACTCAACGCAGAGAATGCATATGTGGTGATTCAAAATGTCTACGCAATGCAGAAGGGGAAGAAGAAGATGCAGCTGTGGAACCAGTAAAAGACTATAACGCTGCACAAGGAATAATTCAAATACAAACTGACATTATTTCAAATAACGTTCTTCCATATGTTGGGCAGTCATTCAAAACCGATGATGAAGCAGAAGAATACTATACAAATTTTGCTCGAAAAAATGGTTTTGCTATCAGAAGAGAACGCTCTAAAGGGAACCAGTCACATCCCTTGGGAGTTTATAAACGGGAACTTGTTTGTCATAGAGCGGGTGTTTCTAATCCTAGAAAAACAGCCGAACCTAAACGTCAAAGAAACAAAAAATCTTCACGTTGCAAATGTGAGGCTCAAATGATAATAAAGAAAATAGTTTCGAAAGGAGTTTCAAGGTGGATGGTGATTCACTTTAGTAATGCTCATAACCATGATTTGTTGGATAGTGAAGAGGTGAAACAACTCCCTGCATATCGTACCATATCTTCCAAAGACCGTGAACTTGTTTTATCTCTAGCAAAGACTGGGGGAAGTGCGAGTACTATAATGAGGACCCTTGCTTCAGAAAAAGGAATAAAGTCTGCTCAACTCACATTTACCGAAAGAGATCTTAGAAATTTTCTTCAGGCTTCTAAAAATATTAATCGAGAAAATGAAGGGGCCGAGCTTTTTAATGCGTGTAAAGCAATGGCAGAGTCGAACCCGGACTTTAGATACGATTTTACAGTGGATGACAACCATGATCTTGAACACATTTCTTGGTCATACGCTGATTCTATACATGCTTATAAAGTATTTGGTGATGTACTAGTGTTTGATACGTCTTATCGTTTGTATGCATATGATCGACCGGTTGGAGTTTGGTTTGGTGTGGATAATTATGGGAATGCTATATTTTTTGGTTGTGTTTTATTGCTTGACGACAAGCCACATTCCTTTAGATGGGCAGTGCAGTCATTTATACAAATAATGGACGGAAAACTCCCACAGACAGTGATAACCGACATCGACAAGGGACTCAGAGATGCAATGGCCAGTGAATTGCCACTAGCAAAGCATGCCTTTGGCTTATGTCATATAACGTCTAAGCTACCTAGCTGGTTCGGTTCAACGCTTGGTTCACAATACGACAAATTTTTGTCTGAATTTCATCAACTGTGCAACTTGGAAAGCACGGAGGAATTCAATCAATTGTGGCATCAGTTGGTTGTTAACTATGGAATCGGTTCAGATAAACATGTAGCTTTATTGTCATATTATCGCACTTATTGGGCTTTGCCGCACTTGCGTGGATGCTTTTCAGCAGGATTGTTGACTAATGGTTTGCAAGACTTCATCAAGTCTCTTCTCAAATTTTTTTTGACCTCGAAGATACATTTGAAAGATTTCGTCGCACAGATGGAAAATGCGGTCGAAGTTCAAAACCAAGTATCTGAAGAGGCAACGATGCGGCTAAACTACCAAAACACGAAAACCAAAACATGCACACCTATGGAAGAGCAAGCAAAAACCACACTCACCCCATATGCCTTCGATCTACTCCAAAAGGAACTCATATCATCGAATCAGTACGCGGCCTTCGAAACAGATGACCGAAGTCACCTTGTCAGACATCGGCTGCACCCCGAAGGTGGTCATTTTGTCCACTGCACCACCACTGACGCCGGCGAAGACGTAATGCAAAACGTGCAATGCACGTGCCAACAGTTCGAAAGTTTCGGTATTCTGTGCAGGCATGCATTAAAAGTTCTATCTTTGAGAAATTGTTTCGTGCTCCCCGATAAGTATTTATTGCCGCGTTGGCGTAGGTCATGCTCCCTGTTTCCTAGAAGCGAGGGGTTCAAGTACAGGTCGTTGGCGCTGAAGTCCCTCGCTTCTGTGATTGTTCAGGAGGCATGTGTAACCAAGGAAAGGTTTGAACATGTGCAGTTGCATATGAATAGGATTGTCGGTTGTGTTAGAGATATGCCTAGCATTGATGAGATGGTGCCGGATGATAAGTTTGAAGAATGGTCTGTGGAAATGGAAAGGTAG

Protein

Gene

>Asa3G00162.1
ATGACAAAAACCTCTTCAAGAAACAATGGTTGTCTTACTCAACGCAGAGAATGCATATGTGGTGATTCAAAATGTCTACGCAATGcagaaggggaagaagaagatgcAGCTGTGGAACCAGTAAAAGACTATAACGCTGCACAAGGAataattcaaatacaaactgacatTATTTCAAATAACGTTCTTCCATATGTTGGGCAGTCATTCAAAACCGATGATGAAGCAGAAGAATACTATACAAATTTTGCTCGAAAAAATGGTTTTGCTATCAGAAGAGAACGCTCTAAAGGGAACCAGTCACATCCCTTGGGAGTTTATAAACGGGAACTTGTTTGTCATAGAGCGGGTGTTTCTAATCCTAGAAAAACAGCCGAACCTAAACGTCAAAGAAACAAAAAATCTTCACGTTGCAAATGTGAGGCTCAAATGATAATAAAGAAAATAGTTTCGAAAGGAGTTTCAAGGTGGATGGTGATTCACTTTAGTAATGCTCATAACCATGATTTGTTGGATAGTGAAGAGGTGAAACAACTCCCTGCATATCGTACCATATCTTCCAAAGACCGTGAACTTGTTTTATCTCTAGCAAAGACTGGGGGAAGTGCGAGTACTATAATGAGGACCCTTGCTTCAGAAAAAGGAATAAAGTCTGCTCAACTCACATTTACCGAAAGAGATCTTAGAAATTTTCTTCAGGCTTCTAAAAATATTAATCGAGAAAATGAAGGGGCCGAGCTTTTTAATGCGTGTAAAGCAATGGCAGAGTCGAACCCGGACTTTAGATACGATTTTACAGTGGATGACAACCATGATCTTGAACACATTTCTTGGTCATACGCTGATTCTATACATGCTTATAAAGTATTTGGTGATGTACTAGTGTTTGATACGTCTTATCGTTTGTATGCATATGATCGACCGGTTGGAGTTTGGTTTGGTGTGGATAATTATGGGAATGCTATATTTTTTGGTTGTGTTTTATTGCTTGACGACAAGCCACATTCCTTTAGATGGGCAGTGCAGGTATGCATTttagcctctctctctctctctcttttgtgtgtgcacccccccccccccctcaaaaagaagaagaagaagaagattcaaaCTACACATGGATGGATCCTTAAATATGATCACATTTGCTTCATTCTATCTTTATTCCCTTAAGTgaagtcaaataaataaaatacaacactCATGTTCGTTTCAACAAATGTTTATACAAGCCACTATTTTAGGCTCTTAGTCCTTTGTTATGCTTTGTCCAATGAGTGCTTGTATGGAAGCCTTTTCAAAAATCTTGTGATATAAATCCAAGCCGAGTTTCTCAGTTGAAGATTCAATTCTTAAATTTGGTCAGAACTCCGACTTGGTTGAATTCACCGAGAGAAAAATCATTCCAGTACACGCTTTAATTAATAATATCAAGACTTACTTGAATCTACAATTCAAGGTTAGTTCTTTTATGACAGAGAAAGGATAAAACAAGAATGCAGATCGACTTTTTGGTTTACGTCTGGAAAATCAAGCATCAAAATTAAACTTGAAACTAAGAATTATTGCAATGAAAGAAGAAACAGTATTTTCACTTATCATAATGCTATTCGAATATGCGATTCACTATTTAAATCCAGATTtgattcaacatttaaaatttatgATACACAATTTGAATCCGGTTCTGAAAATCTTGGGTGTGTAGTACATGCGAAGTCTGgcaatttttgttttgtaaaaaaggaaaaaagaaaagaaaaacacgcTTTCAGTGATATTCATATCCTCCATTAATTTCTAACCTAACTACCATCTTCACTGCTAATCTTGTTGTAGTCATTTATACAAATAATGGACGGAAAACTCCCACAGACAGTGATAACCGACATCGACAAGGGACTCAGAGATGCAATGGCCAGTGAATTGCCACTAGCAAAGCATGCCTTTGGCTTATGTCATATAACGTCTAAGCTACCTAGCTGGTTCGGTTCAACGCTTGGTTCACAATACGACAAATTTTTGTCTGAATTTCATCAACTGTGCAACTTGGAAAGCACGGAGGAATTCAATCAATTGTGGCATCAGTTGGTTGTTAACTATGGAATCGGTTCAGATAAACATGTAGCTTTATTGTCATATTATCGCACTTATTGGGCTTTGCCGCACTTGCGTGGATGCTTTTCAGCAGGATTGTTGACTAATGGTTTGCAAGACTTCATCAAGTCTCTTCTCAAATTTTTTTTGACCTCGAAGATACATTTGAAAGATTTCGTCGCACAGGTATAAAATACGAATATGCACTAAATTACCGAACTTTCTTCTTAAGAAACCACCTAAATCTTTTATTTTTGCATAGCGTTTAGTCACGTGGTTTAGGTAGTTAAAAAAAGCTTTTACACAGCCAAACTTGGCACTATAAATACTGGTTAAATTATGGCATGATGATACCATACAAGAATGCACATAAGTATTGGGACCACACACAAAACACGAATTGGTCAATGAGAATTGGTATTTTTTGCATATGGTATGCACGAAATCGTAGCAAGGTGTATATTTAAGAAACCATGACATGGCAGAAAGAAAGAAACCACTTCAATGTATCATGAAAACAATTGAGAAATTTGTTAGAATCCCAGTTCGGAAACGTGAAGCCAATAATTTCTTCTGGGGAGAAACTGAAGTTCCAACAATAATATTCGCATTGTAATTTTTCTGTAAACCACTAGGAGTAGCTATGTAAGCAGCGGTGTAAGAAAATGCCACTCATGTAAAATTTTCCTTTTGGAAAAAGTGAATTATGTGATCACCACTAGATTTTGTACATACTACTGGAAACATAAAAAAGGTAAAGATGTGTTTGGCttgacttttttttctttctttttttctttttttgcattttcagcatgtatttaaaaatggccataagagGAGAAAGGAttgatttgaaaaatggttttaatgTAAACTTAAAACTGCTTTTTCTTGCCCTTCtctttttggaaaatataaaaacaATTGTCTTCCTTCCCCTTCTCTCCTTTGCTGAAATAAATGCATTTTCTTTTCAACACCGCCTAATCTTGAATGTCATTTGACATACCTATTCCAAAAGCAAaacacaaaaattattttcaagccAAGCGCTACCTTAAACCGTAGAAGTTGACAGATTTTTATTTGGATACCAGAATATGCAAAGTAGTCTTAAATCCTGATTGAACTAAAATATccctgtttgaattattttcttcatcgtatttttCCTGCTGTATTCGACTACCTCGTAGGTCCACCATGGAGGTAAGCATTTGAACCTCACTGGATCAACAGACGTTTAGTTTagtttagtattttttttttttttttttttttttaattactcgTAGTCAACCTACGAGGTAAGCTGTTTAAACCTGTAGGCCCAGAGTGTGGTATGTGCTTAAACCACGCATTCGCCCTGCTTGTTAATTCAGAATCCATGTAGCCATTTTATATGGTTGTCGATAACTACTACAACAACTAAGTCATTAATCTGAAAAAAAAAAGGTTCCATATCCACAAGAGAGACTATGTTTTTACGTTGACTCGCCAAGCCTATCGCAATCCTCTCCTTCTTTACCCTAGATTGAGACAGattgcatagaaaactacacaggcaaTCTACACAGACGGAGTTATGTGTTTGtcaatgatattaaaataaaagtAGATGGTAGAAATCCAATGGGGCAATTTAGTTTagttagttagtttttttttttaaaataattaaattagaggGTTATTCAGCATGTAcatgggttcaaatagaatttgccgtTGAAGTTACATATTGTTGATTTATCTTTATACTAAAAAATCTATTTCAGATGGAAAATGCGGTCGAAGTTCAAAACCAAGTATCTGAAGAGGCAACGATGCGGCTAAACTACCAAAACACGAAAACCAAAACATGCACACCTATGGAAGAGCAAGCAAAAACCACACTCACCCCATATGCCTTCGATCTACTCCAAAAGGAACTCATATCATCGAATCAGTACGCGGCCTTCGAAACAGATGACCGAAGTCACCTTGTCAGACATCGGCTGCACCCCGAAGGTGGTCATTTTGTCCACTGCACCACCACTGACGCCGGCGAAGACGTAATGCAAAACGTGCAATGCACGTGCCAACAGTTCGAAAGTTTCGGTATTCTGTGCAGGCATGCATTAAAAGTTCTATCTTTGAGAAATTGTTTCGTGCTCCCCGATAAGTATTTATTGCCGCGTTGGCGTAGGTCATGCTCCCTGTTTCCTAGAAGCGAGGGGTTCAAGTACAGGTCGTTGGCGCTGAAGTCCCTCGCTTCTGTGATTGTTCAGGAGGCATGTGTAACCAAGGAAAGGTTTGAACATGTGCAGTTGCATATGAATAGGATTGTCGGTTGTGTTAGAGATATGCCTAGCATTGATGAGATGGTGCCGGATGATAAGTTTGAAGAATGGTCTGTGGAAATGGAAAGGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020269052.1	2.5e-291	protein FAR1-RELATED SEQUENCE 11-like
Swissprot	Q9SY66.1	5.8e-144	Protein FAR1-RELATED SEQUENCE 11
trEMBL	A0A5P1EMZ0	1.8e-291	Protein FAR1-RELATED SEQUENCE

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G10240.1	41.15	3e-152	535	FRS11	FAR1-related sequence 11

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa3G00162	AT1G10240.1	627	357	3	60	681	44	663	41.15	3e-152	535
Asa3G00162	AT5G28530.1	686	383	9	9	679	7	675	39.50	5e-145	511
Asa3G00162	AT4G38180.1	572	390	10	64	629	73	633	28.85	6e-67	252

Ortholog group

Species	Genes
Allium cepa	g295751.t1; g519763.t1
Allium fistulosum	AfisC4G05696; AfisC7G06229
Allium sativum	Asa3G00162.1
Arabidopsis thaliana	AT1G10240.1; AT5G28530.1
Oryza sativa	LOC_Os04g36590.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03101.12	FAR1	Domain	78	171	62.2	5.4e-17
PF10551.6	MULE	Domain	293	386	58.1	8.4e-16
PF04434.14	SWIM	Domain	588	610	24.1	1.9e-05

Gene Ontology

Accession	Ontology	Name
GO:0008270	F	zinc ion binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K17604	ZSWIM3; zinc finger SWIM domain-containing protein 3	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network