Detail information of Asa3G00171


Location
GeneChrStartEndStrand
Asa3G00171chr35966769859673126-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK81569.11.6e-53uncharacterized protein A4U43_C01F30650
SwissprotQ8VWK4.12.4e-46MYB transcription factor
trEMBLA0A5P1FWD71.2e-53MYB transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G49950.144.353e-46 182ATTRB1;TRB1telomere repeat binding factor 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag539752.t1
Allium fistulosumAfisC7G06217
Allium sativumAsa3G00171.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain55533.62.9e-08
PF00538.16Linker_histoneDomain13018728.61.2e-06

Gene Ontology
AccessionOntologyName
GO:0000786Cnucleosome
GO:0003677FDNA binding
GO:0003682Fchromatin binding
GO:0006334Pnucleosome assembly
GO:0005634Cnucleus

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09422MYBP; transcription factor MYB, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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