result

Gene information

Detail information of Asa3G00349

Location

Gene	Chr	Start	End	Strand
Asa3G00349	chr3	105859571	105861343	+

Sequences

CDS

>Asa3G00349.1
ATGGAGGGGCCATTTCCTCCAGAGTTCTCAACACTTTGGATTTTATCACAGCTAAGAGTGAGTGATATAAACAGCGACGGGAATTTCCCCCCTCTGAAAAATATGACAAATATGGAAAGATTGATTTTAAGGAACTTTTCTTTGACTGGAAAAATTCCTGATTATATTGGAAAAATGACTATTCTAAGAACCCTAGATTTAAGCTTCAATAACTTATCGGGTGAAATTCCAGGCAATTTAGAATATCTCCCACTTATAACCTACTTGTACTTAACAAACAACTTTCTTGCGGGCTCAATACCAAACTGGATTTTGCGGAGCAGTCAAAATATAGATATATCAAGTAATAATTTCTCAGGACCATCATGGCCAACTAATTGTCAACAGGCAAAAGTGAATTTAGCTGCTAGTTATTTACCTACCTATGGCAACCCGATATCAACATGTTTTATAAGGAGCCTCCCTTGTTCTGGAGAGGCAATGAATTATAATCTGTTCATAAATTGTGGAGGCAGCAGAGTAAAAGTTGGGGCAAATGAACATGAAGAGGATACCTCACAGCAGGGGCCATCGACCTATGGAGCTTCGGCGAGCGGAAAATGGGCATATATGAGTACAGGAGATTTTATAGGAAATCAGAATCCACAATTTATAGCGACAAATTCATCAATTCTAAAAATGAATAACACAGAATTATACACTACAGCTCGTGCCAGTTCACTTTCTCTTAAATATTACGGACTGTGCTTGCAGAAAGGAAATTATACAGTTAATCTACAATTTTCTGAAATAGTATTTACAGATATTCAAGCATATTCTAGTAACGGAATTCGTGTATTTGATGTATATATCCAGGGACGAAATGTTTTGCATGATTTCAATATTGCAAAAGAAGCAAATGGAACGGGAAAAGAACTTGTTAAAACATTTACTGCTATAGTCAGTGAAAATACACTGGAAATACATTTTCAATGGGTCGGAAAAGGGAGTCATCTTGTACCTGCGGTTGGCATATATGGACCTCTAATATCGGCTATATCTATTACTCCAAATTTCAAGCCATATACTGGAAAATCTAAGTTATCGGTAGGAAGTATAGTGGCGATCGTCATTTCTTGTGTTGTATTCATTGCATTTTTTATCTGTCTTGGAATTTGGTGGAGAAGCAGAAAAAAAATAGACAAAGAGCTGAGAGGCTTAGAGCTGATGACTGGATACTTCAGTTTGAGGCAACTGAAGACCGCAACACGTAACTTTGATCCAGCAAATAAAATTGGTGAAGGAGGGTTTGGTCCAGTTTACAAGGGTGTACTACCAGATGGTTCAGTTATTGCTGTGAAACAACTTTCATCAAAGTCGAAACAAGGGAATCGTGAATTTTTAAATGAGATAGGAATAATATCAGCATTGCAGCACCCAAATCTGGTCAAGTTATTTGGTTGTTGCATTGAAGAAAGCCAACTACTAGTTATATATGAGTACATGGAAAATAATAGCCTTGCTCGTGCCTTATTTGGTCCAGAAAGAACCCGGTTGATGTTGGATTGGACAACAAGGTGCAAAATTTGCCTAGGCATCGCAAGAGGTTTGGCTTATCTACACGAAGAGTCTAGGCTAAAAATTGTACATAGAGACATCAAGGCTGGACCTAGCACTTCTATGCACGAACCCTTCGCCAACTCTCAGTCCTTCGATGTCGAGTGTTGTAAGCATGCTAGAAGGAAAAACACCAGTTCAAGTACCGGTGATGAAGAAGACAATTACAGAAGGTGA

Protein

Gene

>Asa3G00349.1
ATGGAGGGGCCATTTCCTCCAGAGTTCTCAACACTTTGGATTTTATCACAGCTAAGAGTGAGTGATATAAACAGCGACGGGAATTTCCCCCCTCTGAAAAATATGACAAATATGGAAAGATTGATTTTAAGGAACTTTTCTTTGACTGGAAAAATTCCTGATTATATTGGAAAAATGACTATTCTAAGAACCCTAGATTTAAGCTTCAATAACTTATCGGGTGAAATTCCAGGCAATTTAGAATATCTCCCACTTATAACCTACTTGTACTTAACAAACAACTTTCTTGCGGGCTCAATACCAAACTGGATTTTGCGGAGCAGTCAAAATATAGATATATCAAGTAATAATTTCTCAGGACCATCATGGCCAACTAATTGTCAACAGGCAAAAGTGAATTTAGCTGCTAGTTATTTACCTACCTATGGCAACCCGATATCAACATGTTTTATAAGGAGCCTCCCTTGTTCTGGAGAGGCAATGAATTATAATCTGTTCATAAATTGTGGAGGCAGCAGAGTAAAAGTTGGGGCAAATGAACATGAAGAGGATACCTCACAGCAGGGGCCATCGACCTATGGAGCTTCGGCGAGCGGAAAATGGGCATATATGAGTACAGGAGATTTTATAGGAAATCAGAATCCACAATTTATAGCGACAAATTCAtcaattctaaaaatgaataacaCAGAATTATACACTACAGCTCGTGCCAGTTCACTTTCTCTTAAATATTACGGACTGTGCTTGCAGAAAGGAAATTATACAGTTAATCTACAATTTTCTGAAATAGTATTTACAGATATTCAAGCATATTCTAGTAACGGAATTCGTGTATTTGATGTATATATCCAGGGACGAAATGTTTTGCATGATTTCAATATTGCAAAAGAAGCAAATGGAACGGGAAAAGAACTTGTTAAAACATTTACTGCTATAGTCAGTGAAAATACACTGGAAATACATTTTCAATGGGTCGGAAAAGGGAGTCATCTTGTACCTGCGGTTGGCATATATGGACCTCTAATATCGGCTATATCTATTACTCCAAATTTCAAGCCATATACTGGAAAATCTAAGTTATCGGTAGGAAGTATAGTGGCGATCGTCATTTCTTGTGTTGTATTCATTGCATTTTTTATCTGTCTTGGAATTTGGTGGAGAAGCAGAAAAAAAATAGACAAAGAGCTGAGAGGCTTAGAGCTGATGACTGGATACTTCAGTTTGAGGCAACTGAAGACCGCAACACGTAACTTTGATCCAGCAAATAAAATTGGTGAAGGAGGGTTTGGTCCAGTTTACAAGGGTGTACTACCAGATGGTTCAGTTATTGCTGTGAAACAACTTTCATCAAAGTCGAAACAAGGGAATCgtgaatttttaaatgagataggaATAATATCAGCATTGCAGCACCCAAATCTGGTCAAGTTATTTGGTTGTTGCATTGAAGAAAGCCAACTACTAGTTATATATGAGTACATGGAAAATAATAGCCTTGCTCGTGCCTTATTTGGTCCAGAAAGAACCCGGTTGATGTTGGATTGGACAACAAGGTGCAAAATTTGCCTAGGCATCGCAAGAGGTTTGGCTTATCTACACGAAGAGTCTAGGCTAAAAATTGTACATAGAGACATCAAGGCTGGACCTAGCACTTCTATGCACGAACCCTTCGCCAACTCTCAGTCCTTCGATGTCGAGTGTTGTAAGCATGCTAGAAGGAAAAACACCAGTTCAAGTACCGGTGATGAAGAAGACAATTACAGAAGGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020250161.1	1.4e-202	probable LRR receptor-like serine/threonine-protein kinase At1g53430 isoform X2
Swissprot	C0LGG8.1	5.4e-143	Probable LRR receptor-like serine/threonine-protein kinase At1g53430
trEMBL	A0A1R3L6P9	2.5e-201	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G53440.1	53.13	2e-171	599		Leucine-rich repeat transmembrane protein kinase

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa3G00349	AT1G53440.1	591	261	12	1	581	243	827	53.13	2e-171	599
Asa3G00349	AT1G53440.1	153	106	2	1	152	147	292	25.49	2e-07	54.7
Asa3G00349	AT1G53440.1	147	81	3	1	121	100	246	27.21	1e-06	52.0

Ortholog group

Species	Genes
Allium cepa	g123040.t1; g203183.t1; g307852.t1; g316004.t1; g383362.t1; g383364.t1
Allium fistulosum	AfisC5G01456; AfisC5G01457; AfisC5G01458; AfisC5G01459
Allium sativum	Asa0G02357.1; Asa0G04626.1; Asa1G02460.1; Asa3G00349.1; Asa4G06527.1; Asa5G05461.1; Asa6G05451.1; Asa6G06069.1; Asa6G06071.1; Asa6G06122.1; Asa7G01905.1; Asa7G03196.1; Asa7G03197.1; Asa7G05855.1; Asa7G06026.1; Asa8G02115.1
Arabidopsis thaliana	AT1G53430.1; AT1G53430.2; AT1G53440.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF11721.5	Malectin	Domain	164	346	138.2	2.5e-40
PF00069.22	Pkinase	Domain	422	548	86.3	1.9e-24

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004672	F	protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network