result

Gene information

Detail information of Asa3G00535

Location

Gene	Chr	Start	End	Strand
Asa3G00535	chr3	155575009	155576493	+

Sequences

CDS

>Asa3G00535.1
ATGGCACTAACCCCTTCCTTCGTACCCAAATCCTCCCTCTTCCAGAAACCCAGTCCCAGTCCACCCACCCTCCACTCCAAGCTCCCCCTCCGCAAAATCCCCGGCGACCATGGCCTCCCCATCATCGGCCCCTTCAAAGACAGGCTCGACTTCTTCTACCGGCAGGGCCGGGACGAGTTCTTCAAATCCCGGATCCGACTCCACAACTCCACCGTCTTCAAAGTCAATATGCCTCCCGGGCCCTTCCTCTCCTCCGACCCTCGCGTCATCGCCCTCCTCGACTCCGCCTCTTTCCCCGTCCTCTTCGACCCCGACCTCGTCGAAAAGAAAGACCTGTTCACCGGCACCTTCACGCCCTCCACCGACCTCTCCGGCGGCCACCGCACCCTCTCCTACCTCGACGTCCGCGAGCCCAACCACTCCGATCTTAAAAAGCTCATCTTCCACATGCTCTCCACCCGTCGCCACTTCGTCGTCCCTGAATTCGTGCAGACTTTCAACCAATTGTTCGAAACCATGGAATCCGAGATAGAGAAATCCGGTAAAGCCGACTTCTCGGATGCCAACAATCAGGCTTCCTTCAATTTCCTCATTCGCGCTTTGCTGGGCAAGGACCCGTTAGGGTCGAAGCTCGGGTCCGATGGGCCGAATCTCATTACGAAGTGGGTTCTGATCCAGCTCGGCCCGATCCTGACTTTGGGGTTCCCGAGCCTTTTGGAGGATTTGATTCTGCATTCGATCCGCCTACCGTCGTTTCTAGTGAAGAAAGAGTACGAAAGGCTGGTGGATTTCTTTCAGACAGCATCCGAGCCGTTATTGGAGGAGGCGGATCGAATGGGCATAAGCAGGGATGAGGCAATGCACAACATAATGTACACAATCTGCTTCAACGCCTATGGTGGCATGACCATATTGCTGCCTAGCCTGATAAAGTGGGTGGGCCGGGCCGGGTCGGTCTTACACGGCAAGCTAGCATCCGAGGTCCGGACCGCGGTCCGATCCAACGGTGGGGAGGTGACGATGAAGGCGATAGAGGAAATGGAGCTGGTGAAGTCGGTAGTGTACGAAGCGTTACGGATCGAGCCGCCCGTGCCGTTGCAGTACGGGCGGGCTCGGCGGGACTTTCTGCTGGAGAGTCACGACGCGTGCTTCGAGGTTCGGGCTGGGGAGATGCTGTTCGGGTTCCAACCGTTTGCGACCCGGGATGCACGGGTCTTTGACCGGGCCGAGGAGTTTGTGGGGGACAGGTTCGTGGGTCCAAAAGGGGAGAAGTTGTTGAAGTATGTGCTGTGGAGCAATGGGAGGGAGACGGAGACGCCGACCGATAAAAACAAGCAGTGTGCGGGGAAGGATTTTGTGGTGATGGTGGCGAGGCTGATGGTGGTGGAGATGTTTTTGAGGTATGATACCTTTCATATTGAGTGTGGGACGTCGCCTTTAGGGTCGTCGGTTAAGTTCACGTCCTTGAAGAGGGCTACATTTTGA

Protein

Gene

>Asa3G00535.1
atggcaCTAACCCCTTCCTTCGTACCCAAATCCTCCCTCTTCCAGAAACCCAGTCCCAGTCCACCCACCCTCCACTCCAAGCTCCCCCTCCGCAAAATCCCCGGCGACCATGGCCTCCCCATCATCGGCCCCTTCAAAGACAGGCTCGACTTCTTCTACCGGCAGGGCCGGGACGAGTTCTTCAAATCCCGGATCCGACTCCACAACTCCACCGTCTTCAAAGTCAATATGCCTCCCGGGCCCTTCCTCTCCTCCGACCCTCGCGTCATCGCCCTCCTCGACTCCGCCTCTTTCCCCGTCCTCTTCGACCCCGACCTCGTCGAAAAGAAAGACCTGTTCACCGGCACCTTCACGCCCTCCACCGACCTCTCCGGCGGCCACCGCACCCTCTCCTACCTCGACGTCCGCGAGCCCAACCACTCCGATCTTAAAAAGCTCATCTTCCACATGCTCTCCACCCGTCGCCACTTCGTCGTCCCTGAATTCGTGCAGACTTTCAACCAATTGTTCGAAACCATGGAATCCGAGATAGAGAAATCCGGTAAAGCCGACTTCTCGGATGCCAACAATCAGGCTTCCTTCAATTTCCTCATTCGCGCTTTGCTGGGCAAGGACCCGTTAGGGTCGAAGCTCGGGTCCGATGGGCCGAATCTCATTACGAAGTGGGTTCTGATCCAGCTCGGCCCGATCCTGACTTTGGGGTTCCCGAGCCTTTTGGAGGATTTGATTCTGCATTCGATCCGCCTACCGTCGTTTCTAGTGAAGAAAGAGTACGAAAGGCTGGTGGATTTCTTTCAGACAGCATCCGAGCCGTTATTGGAGGAGGCGGATCGAATGGGCATAAGCAGGGATGAGGCAATGCACAACATAATGTACACAATCTGCTTCAACGCCTATGGTGGCATGACCATATTGCTGCCTAGCCTGATAAAGTGGGtgggccgggccgggtcggtctTACACGGCAAGCTAGCATCCGAGGTCCGGACCGCGGTCCGATCCAACGGTGGGGAGGTGACGATGAAGGCGATAGAGGAAATGGAGCTGGTGAAGTCGGTAGTGTACGAAGCGTTACGGATCGAGCCGCCCGTGCCGTTGCAGTACGGGCGGGCTCGGCGGGACTTTCTGCTGGAGAGTCACGACGCGTGCTTCGAGGTTCGGGCTGGGGAGATGCTGTTCGGGTTCCAACCGTTTGCGACCCGGGATGCACGGGTCTTTGACCGGGCCGAGGAGTTTGTGGGGGACAGGTTCGTGGGTCCAAAAGGGGAGAAGTTGTTGAAGTATGTGCTGTGGAGCAATGGGAGGGAGACGGAGACGCCGACCGATAAAAACAAGCAGTGTGCGGGGAAGGATTTTGTGGTGATGGTGGCGAGGCTGATGGTGGTGGAGATGTTTTTGAGGTATGATACCTTTCATATTGAGTGTGGGACGTCGCCTTTAGGGTCGTCGGTTAAGTTCACGTCCTTGAAGAGGGCTACATTTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010910500.1	1.3e-196	allene oxide synthase 1, chloroplastic
Swissprot	K4BV52.1	1.9e-181	Cytochrome P450 74A
trEMBL	A0A8K0IVK8	5.1e-200	Allene oxide synthase 1, chloroplastic

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G42650.1	59.96	5e-173	604	AOS;CYP74A;DDE2	allene oxide synthase

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa3G00535	AT5G42650.1	467	187	0	28	494	52	518	59.96	5e-173	604
Asa3G00535	AT4G15440.1	376	212	4	105	477	2	376	42.55	4e-84	308

Ortholog group

Species	Genes
Allium cepa	g200205.t1
Allium fistulosum	AfisC7G05785
Allium sativum	Asa3G00535.1
Arabidopsis thaliana	AT5G42650.1
Oryza sativa	LOC_Os03g55800.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	323	468	39.8	2.1e-10

Gene Ontology

Accession	Ontology	Name
GO:0009055	F	electron carrier activity
GO:0005506	F	iron ion binding
GO:0055114	P	oxidation-reduction process
GO:0016705	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	F	heme binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K01723	AOS; hydroperoxide dehydratase	EC:4.2.1.92	alpha-Linolenic acid metabolism	ko00592

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network