Detail information of Asa3G00693


Location
GeneChrStartEndStrand
Asa3G00693chr3195178050195188008-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020094088.13.3e-306probable helicase CHR10 isoform X2
SwissprotF4IV45.15.6e-279Protein CHROMATIN REMODELING 10
trEMBLA0A6P5FKY72.4e-306probable helicase CHR10 isoform X2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G44980.259.250.01019ASG3;CHR10SNF2 domain-containing protein / helicase domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag60621.t1
Allium fistulosumAfisC7G05584
Allium sativumAsa3G00693.1
Arabidopsis thalianaAT2G44980.1; AT2G44980.2
Oryza sativaLOC_Os03g01200.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00176.20SNF2_NFamily61352171.61.7e-50
PF00271.28Helicase_CFamily37548234.51.8e-08

Gene Ontology
AccessionOntologyName
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0004386Fhelicase activity
GO:0005524FATP binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K20092CHD1L; chromodomain-helicase-DNA-binding protein 1-likeEC:3.6.4.12 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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