result

Gene information

Detail information of Asa3G00961

Location

Gene	Chr	Start	End	Strand
Asa3G00961	chr3	263895545	263896900	-

Sequences

CDS

>Asa3G00961.1
ATGGCGATTAGAGCCTTACATGGGCGCCGTTTTCTCCACATTACCCTTAAATCCTTCCTGGAAATCCAGTCTCTCTCAACAACCCCAAATCATATAGCAAAGGTTTTACCCCAAATGCTAGAAACCATTGAATCCAATACCCAAGCGTCGATTGCGACCACTTTGCAAAGGTACGGCTTCCCCCCTTTTCAGACCCACGAATTCATCAAAAAGAATCATTTTTTATCGGCTACGTCATCTGTTAACATTGGCAGTTGCATCAACTCTTTGTTACAGTTTGGTATTCCCCAAAATGATTTGCCTTTGTTGCTAATTAGTTGCCCTAAAGTTTTAGAACTTGAATTTCTGAACGAATGGAAAATGGCCTTCTCAAAACTTGAATGCTGTAGCACGTCCGTAGTCACAAGGATCATTGAACATGCTGCAAAGTTCCAGATTAAACCGTATTATTTTTCTAAAAATGTGGAAATAATGAAGGAGAATTTCGGCCTTTCCGATAAAACACTGATTGGTGTTTTTGAAGTATTACCCACTGCATTCATGAAGGGGCCCATCAATGTTAGTAGAAGAATAGAAATGTTAACTGAATTTGGAATAAGCAAGAATGATATTGATACAATTTGCTCTAGATATCCTGAATTCTTAGCACTAGGAGTTGATGGTAGATTAAAACCTTTGTTTGACGAATTTAGAGATCTGGGATTTACGCAAAATGAGGTTAGAAAGAATTTAGTTGAAGACCCAAAGACAGTTTTAAGCATGGAAGTAGGTGAAATCTCTAAATGTGTGCAGTTGATAAAAAGTTTAAAATGTAGAGTTCCGATCAAGGAGAAAATTCTTGCATTTGGCTATTTCAAAGGTGGAATTCAAGTAAAGAATAGAATTGATTTCTTATGCAAGTATGGTTTAATTCGAAGAGATGCGTTCAAGGTTCTATATGTAGAGCCTAGAACCATAATTCAGAAGCTAGAGGATATCGAGAAGAAAATTGATTTCTTGGTACAGAAAATGGGGTTTACAGTCGATCATTTAGTGCTATTTCCGGACTATCTAGGTGTGAGTTTGGAGAAACACATTATACCACGTTTCAGTGTTATCCAGCATTTGAAGTCGATTGGGGGGCTTTGTTTTGAGGTGGAACTGAAACATTTCGTAAGGCTTACTAGGCTGAAATTTTATAATTTGTATGTGAAACCATACCCTGAATGTGAAGAAATATTTAATGCAACTGTTAGGGAAAAAGAAGTTAGACCTCGCCATCCTCCTGGTTTATGGAAGATGTTTAAGCCACCACGTCATCCTGATGGTGAAGAAGATGTTAAAAACATTAGATTATTTGTGGATTCTCTTGTGTAA

Protein

Gene

>Asa3G00961.1
ATGGCGATTAGAGCCTTACATGGGCGCCGTTTTCTCCACATTACCCTTAAATCCTTCCTGGAAATCCAGTCTCTCTCAACAACCCCAAATCATATAGCAAAGGTTTTACCCCAAATGCTAGAAACCATTGAATCCAATACCCAAGCGTCGATTGCGACCACTTTGCAAAGGTACGGCTTCCCCCCTTTTCAGACCCACGAATTCAtcaaaaagaatcattttttatcGGCTACGTCATCTGTTAACATTGGCAGTTGCATCAACTCTTTGTTACAGTTTGGTATTCCCCAAAATGATTTGCCTTTGTTGCTAATTAGTTGCCCTAAAGTTTTAGAACTTGAATTTCTGAACGAATGGAAAATGGCCTTCTCAAAACTTGAATGCTGTAGCACGTCCGTAGTCACAAGGATCATTGAACATGCTGCAAAGTTCCAGATTAAACcgtattatttttctaaaaatgtgGAAATAATGAAGGAGAATTTCGGCCTTTCCGATAAAACACTGATTGGTGTTTTTGAAGTATTACCCACTGCATTCATGAAGGGGCCCATCAATGTTAGTAGAAGAATAGAAATGTTAACTGAATTTGGAATAAGCAAGAATGATATTGATACAATTTGCTCTAGATATCCTGAATTCTTAGCACTAGGAGTTGATGGTAGATTAAAACCTTTGTTTGACGAATTTAGAGATCTGGGATTTACGCAAAATGAGGTTAGAAAGAATTTAGTTGAAGACCCAAAGACAGTTTTAAGCATGGAAGTAGGTGAAATCTCTAAATGTGTGCAGTTGATAAAAAGTTTAAAATGTAGAGTTCCGATCAAGGAGAAAATTCTTGCATTTGGCTATTTCAAAGGTGGAATTCAAGTAAAGAATAGAATTGATTTCTTATGCAAGTATGGTTTAATTCGAAGAGATGCGTTCAAGGTTCTATATGTAGAGCCTAGAACCATAATTCAGAAGCTAGAGGATATCGAGAAGAAAATTGATTTCTTGGTACAGAAAATGGGGTTTACAGTCGATCATTTAGTGCTATTTCCGGACTATCTAGGTGTGAGTTTGGAGAAACACATTATACCACGTTTCAGTGTTATCCAGCATTTGAAGTCGATTGGGGGGCTTTGTTTTGAGGTGGAACTGAAACATTTCGTAAGGCTTACTAGGCTGAAATTTTATAATTTGTATGTGAAACCATACCCTGAATGTGAAGAAATATTTAATGCAACTGTTAGGGAAAAAGAAGTTAGACCTCGCCATCCTCCTGGTTTATGGAAGATGTTTAAGCCACCACGTCATCCTGATGGTGAAGAAGATgttaaaaacattagattatttGTGGATTCTCTTGTGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020268706.1	4.4e-140	transcription termination factor MTERF15, mitochondrial
Swissprot	Q9C6A1.1	2.9e-96	Mitochondrial transcription termination factor 15
trEMBL	A0A5P1ES48	3.2e-140	Uncharacterized protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G74120.1	40.41	2e-96	350		Mitochondrial transcription termination factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
Asa3G00961	AT1G74120.1	443	255	5	16	451	5	445	40.41	2e-96	350
Asa3G00961	AT1G62150.1	253	129	9	153	402	249	447	26.48	1e-08	58.5
Asa3G00961	AT1G62085.1	127	79	2	290	409	331	457	32.28	5e-08	56.2

Ortholog group

Species	Genes
Allium cepa	g340938.t1
Allium fistulosum	AfisC7G05163
Allium sativum	Asa3G00961.1
Arabidopsis thaliana	AT1G74120.1
Oryza sativa	LOC_Os12g30610.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02536.11	mTERF	Family	26	249	61.0	8.3e-17
PF02536.11	mTERF	Family	290	390	54.4	8.2e-15

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K15032	MTERFD; mTERF domain-containing protein, mitochondrial	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network